Labeo rohita (rohu): 127157453
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Entry
127157453 CDS
T09007
Symbol
spata5l1
Name
(RefSeq) spermatogenesis-associated protein 5-like protein 1
KO
K26051
ribosome biogenesis protein SPATA5L1 [EC:
3.6.4.10
]
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lroh03009
]
127157453 (spata5l1)
Enzymes [BR:
lroh01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.4 Acting on acid anhydrides to facilitate cellular and subcellular movement
3.6.4.10 non-chaperonin molecular chaperone ATPase
127157453 (spata5l1)
Ribosome biogenesis [BR:
lroh03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
127157453 (spata5l1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
AAA_16
AAA_5
RuvB_N
AAA_22
AAA_14
AAA_33
AAA_2
TIP49
ABC_tran
bpMoxR
Rad17
AAA_7
RNA_helicase
NTPase_1
Mg_chelatase
AAA_11
nSTAND3
DUF815
DUF2087
RhoGAP_pG1_pG2
Molydop_binding
Motif
Other DBs
NCBI-GeneID:
127157453
NCBI-ProteinID:
XP_050956667
LinkDB
All DBs
Position
Unknown
AA seq
752 aa
AA seq
DB search
MTYMADLKVLPRDAVDSDTQRCRMGPALMSGLGLRLGSPVLIRVQQGACLCTAWPRQDLA
EGFLQISTQCATPDLSAQTLNGLTVKPAHIKPLTCVKLSCVTLKVFVQSLEYKRKVSEQS
VQELLKELLEGLYVHQGHLVDLSCAKTEIRFVQVEKVNSGSQKAGLITARTRVDVNVLQT
VKHLERRQEVSASTLGGLEEVYASLKEMITFPLLYPGTLRQLGLSCPRGLLLIGPPGVGK
TLLVRCVARDIGATLVTVNGPEVTGSRPGESEENLRRMFDKAREAAEEGPCVLLIDEIDS
LCPRRTGSSSAPENRLVAQLLTLMDAIGSHEGFVIIGATNQPDALDPALRRPGRFDREVI
VGVPSLLQRRSILKCVCREMPLSPDVDLSVIAEMTCGYVGADLSALSREAALQAMRQSQA
GASESVSMQHFMKALRHVQPSCLRSSIGATDFKPISWEQIGGLDDVKLKLKQSIEWPMRF
PEAFVRLGVSRPRGVLLYGPPGCAKTTLVKAAASSSHCTFLSLSGAELFSPYVGDSEKTL
AQLFAQARACAPSIVFLDEIDSMVGSRADASSHSVQSQVLSVLLTELDGVGIRTVERRST
GRKIAQLEGGEQEETRLQQMELQEVCNKDVLIVAATNRPEVLDSALLRPGRLDQIIYVPP
PDREARLAVLRVCTNGVPLHEDVCLQDLAAQTELFSGADLENLCKEAALLALREDGLAVS
CVRQKYFLKALQSLSPSLSPGQLQQHFHSSLY
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atgacatacatggcggatctgaaagttcttccacgagacgccgtggactcggacacgcag
cgctgtcgaatgggtccggctctgatgtccgggttaggcctgagactgggctctccggtt
ctgatccgggttcagcagggcgcgtgtctctgcaccgcatggccacggcaggacctcgca
gagggattcctgcagatcagcactcagtgtgcgacccctgacctcagcgcacaaacactc
aacggactcacggttaaaccggcgcacatcaaacccctcacctgcgtcaaactctcctgt
gtgaccctgaaagtgtttgtgcagagtctggaatacaagaggaaggtttctgagcagagc
gttcaggagctgctgaaggagctgctcgagggtctgtacgtgcaccagggtcatttggtg
gacctgtcctgtgccaaaacagagatcaggtttgtgcaggttgagaaggtgaactcgggc
tcgcagaaagctggtctgataacagccagaacccgcgtggacgtcaacgtgctgcagacc
gttaaacacttggagaggcggcaggaggtctctgcgtcaactctgggcggcctggaggag
gtttacgcctcgctgaaagagatgatcacatttcctctgctttacccagggactctgcgg
cagctgggattgtcgtgtccgagaggactccttctgatcggaccgcccggcgtcgggaag
acccttctcgtgcgctgcgtggcgagagacatcggggccacattagtgaccgtaaacggg
ccggaagtcacaggttctcgacccggagagagtgaagagaacctgcggcggatgtttgat
aaggcgcgggaggcagcagaggagggtccgtgtgttctgctcatcgatgagattgattcc
ctgtgcccgaggcggacggggagcagcagcgcaccggagaatcgcctcgtcgctcagctg
ctgacattaatggatgcaatcggcagtcacgagggcttcgtcatcatcggagccacaaac
caaccagacgctctcgacccggcgctcaggagacccgggaggttcgacagagaggtgatc
gtcggcgttccctcgctgctgcagaggcgcagtattctgaagtgcgtgtgccgggagatg
ccgctctcccctgatgtggatctcagtgttattgctgaaatgacgtgtggctacgttggg
gcggatctgagcgcgctcagtagagaggcagcgctgcaggccatgcgtcagtcgcaggca
ggagcgagcgagtccgtgtcgatgcagcacttcatgaaggcgctgcggcacgtgcagccg
tcgtgtttgaggagcagcataggagcgactgacttcaaacccatcagctgggagcagatc
ggaggactagacgacgtcaaactcaaacttaaacagagtatcgagtggcccatgaggttt
ccagaggcatttgtgcggttgggtgtttctcggcccagaggagtgctgttgtacgggccg
cccggctgcgccaaaaccacgctggtgaaagcagctgcatcttcatcacactgcaccttc
ctctccctcagcggggctgagctgttctctccttatgtgggagactcagagaaaacactg
gcgcagctgtttgctcaagcgcgtgcgtgcgctccctccatcgtgttcctggatgagatc
gacagtatggtgggctctcgagcggacgcttcctctcacagcgtgcagtcgcaggttctg
tcggttctgttgactgagctggacggggtgggaatccggaccgtggagagacgcagcacc
ggcagaaagatcgctcagttagaaggaggagagcaggaggagaccagactacagcagatg
gaactccaggaagtgtgtaataaggatgttttgatcgtggctgccactaatagaccggag
gttttggacagcgctctgctcagacccggccgactcgaccagatcatatacgttccacct
ccagaccgtgaggctcgattggccgtgttgcgcgtctgcactaatggcgtcccgctgcat
gaggacgtgtgtctgcaggatctggctgctcaaacggagctcttctctggagctgatcta
gaaaacctgtgcaaagaggcggctcttctggctctacgtgaggacggactcgctgtttcc
tgcgtgaggcagaagtattttctgaaggcgcttcagagtttgagtccatcgctgagtccc
ggacagcttcagcaacactttcactcaagtctctattaa
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