Labeo rohita (rohu): 127157561
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Entry
127157561 CDS
T09007
Name
(RefSeq) LOW QUALITY PROTEIN: B-cadherin-like
KO
K05689
cadherin 1, type 1, E-cadherin
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04371
Apelin signaling pathway
lroh04514
Cell adhesion molecules
lroh04520
Adherens junction
lroh05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
127157561
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
127157561
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
127157561
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
127157561
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lroh03036
]
127157561
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lroh04515
]
127157561
04090 CD molecules [BR:
lroh04090
]
127157561
Chromosome and associated proteins [BR:
lroh03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
127157561
Cell adhesion molecules [BR:
lroh04515
]
Cadherins
Major cadherins
127157561
CD molecules [BR:
lroh04090
]
Proteins
127157561
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_pro
TM_ErbB1
Cadherin_4
Glucodextran_B
DUF6598
DUF4861
Motif
Other DBs
NCBI-GeneID:
127157561
NCBI-ProteinID:
XP_050956741
LinkDB
All DBs
Position
Unknown
AA seq
885 aa
AA seq
DB search
MACVRILRLGVIVFLCQVLSCGYAEESTCTPGFESELFVFEVHRDHLHRGKRLGKVTFNN
CDGRTRTLFQSVDKRFEVNTDGTVSLKRQVTLHEGHKVFSVHAWDSNGKKHTVSVKVEHV
HHHKEHHMDTVMNISAPEMELPSDQVLTFPKSSTGLKRAKRGWVIPPFNLPENSRGPFPM
KLVQIKSDYALETQMVYSITGEGADQDPKGIFTIERLSGNLMVTQPLDXEKKASYSLVAH
ATGLGVNIAEKPMPIEVIVSDQNDNKPVFTQNPFNGRVHEAAGKDYEFMTVTATDADDPN
EHNGIVTYTIFSQEPPLPKPNLFDINTSTGTIRVREPGMDREQYPRYTLLVVATDGQGQG
FSTTGTAVITITDSNDNAPQFEQTSHIVSVPENKVGAVVATLTVTDGDEVGSSAWSTKYR
IISGDKGGFFNVSTGPSQLEGIITTVKPLDFEKTKQYVLSVIVENDDPFVGSLPTSTATV
TVNVEDVNEPPEFNPKERIIYKSEDAPVDKELVIYTATDPDTGKAQKITYRMGNDPAGWL
SVSPDTGAIKVRNLMDRESAYVKDGKYRATVLAVDNDATSPATGTGTLLIELENVNDNPP
VINEREISICNRGSAPVLLSITDKDGPPFAAPFSVETQGETSKNWSTSMNDTLTGVYLQL
KTQLEQGVYNIVLRVYDQHKLYQDSSIQATVCECTGQEVLCRDVRISGLPLSGVLGILGG
ILALLLLLLLLLLFMRRKNSTKKEPLLPEDDIRDNIYYYDEEGGGEDDQDYDLSVLHRGL
DNRPEVFRNDVAPTFLPAPQYRPRPANPEEIGTFIDDNLKAADNDPTAPPYDSLLVFDYE
GGGSDAGSLSSLNSSSSGHDQDYDFLNEWGPRFKKLADMFGGGED
NT seq
2658 nt
NT seq
+upstream
nt +downstream
nt
atggcgtgtgtgaggatcttgcgattgggagttatcgttttcctttgtcaggtattgtcg
tgtggatatgcggaggagtcaacatgtacacctgggtttgagtcggagttattcgttttt
gaagtgcacagagatcaccttcacaggggaaaaagactaggaaaagtaacttttaataac
tgcgatggaagaacaagaacgctctttcagtccgttgacaagcggtttgaggtgaacacg
gatggtactgtatcgctgaagagacaagtgactcttcatgaaggccacaaggtgttttct
gtgcacgcttgggactccaatggcaagaagcacactgtatctgtaaaagttgagcatgtc
caccatcataaggaacatcacatggatacggtcatgaacatctccgcgccagagatggaa
ttgccctctgatcaggtactgacttttccaaagtcttcaactggtctaaagagagcaaag
agaggttgggttattcctccgtttaatctacctgaaaacagccgaggtcctttcccaatg
aagctggtccagataaagtcagactatgccctggaaactcaaatggtatacagcatcaca
ggtgaaggagcggatcaagacccaaaggggatttttactattgaaagattgtcagggaat
ctcatggtgactcagccactcgacnnagagaaaaaagcttcatacagtcttgtagcgcat
gctacaggacttggtgtgaatatagcagaaaaaccaatgcctattgaggtcattgtgagc
gaccaaaatgataataagcctgtgtttactcaaaacccttttaatggacgcgttcatgaa
gctgctggaaaagattatgagtttatgacggtcacagccactgatgcagacgacccaaat
gagcacaatggtatagtcacctatacaattttcagccaagagccgccgttgccaaaacca
aacttgtttgatatcaacacttcaactggaaccattcgtgtgcgagaaccaggcatggac
agagagcaataccccagatatactttgttagttgtagctactgacgggcaaggacaaggt
ttttcaaccactggcacagctgttattacaattactgacagcaatgataacgcacctcag
tttgagcaaacctcgcacatcgtatctgtgccagagaataaagtaggggctgtagtggcc
acacttacagttactgatggagatgaagttggatcatctgcctggtcaaccaagtatcgt
attattagtggtgataagggtgggtttttcaatgtcagtactggacccagccagctggag
ggcattatcaccactgtaaagcccctggactttgagaagaccaagcaatacgttctgtct
gtgattgttgagaatgatgatccttttgttggttctttgcccacttccactgccacagtc
acagtgaatgtagaagatgtaaatgaaccacctgagttcaatccaaaggagaggattatt
tacaaatctgaagatgcaccagttgataaggaattagttatttatacagccactgatcca
gacactggaaaagcgcagaagataacgtatagaatgggtaatgatcctgctggttggcta
agtgtgtctccagatactggagcaattaaagtcagaaaccttatggatagagaatctgcc
tatgtgaaagacggcaaatacagagctaccgttttggccgtggataatgatgcaacatct
cctgcgactggcacaggaaccctgctaattgaattggagaatgtaaatgacaaccctcct
gttattaatgaaagagagataagcatttgcaatcgtggatcagccccggttcttctctct
ataacggacaaagacggacctccttttgctgcaccctttagcgttgagacccaaggagaa
accagtaaaaactggtccacctcaatgaatgacacattaactggtgtttatctgcaactc
aagacccagttggagcagggggtctacaatatcgtcctgagagtttatgatcagcataag
ctgtatcaggacagctccattcaggcaactgtgtgtgagtgcacaggacaagaagtcctg
tgtcgtgacgtgcgtatatcagggttgccactatctggagttcttgggatcctgggagga
atcttggctctgctgttgctcctcctccttctgctattgttcatgaggagaaaaaacagt
accaaaaaagaacccctccttcctgaggatgacataagagacaacatctactattatgat
gaggaaggcggtggcgaagacgatcaggattatgatttgagtgtgttgcatcgtggcctg
gacaacagacctgaagtgttccgaaatgatgtggctcccacctttctgccagcgccgcag
tatagaccacgaccagccaaccctgaggagattgggacatttattgatgataatctgaag
gctgcagataatgaccccacagcacccccatacgactctcttctggtgtttgactatgaa
ggaggaggctcagatgcaggttcactcagctcccttaactcttccagctcaggacacgac
caagactatgacttcctcaatgagtggggcccacgctttaagaagctagcagacatgttt
ggaggaggagaggattaa
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