Labeo rohita (rohu): 127157650
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Entry
127157650 CDS
T09007
Name
(RefSeq) interferon alpha-13-like
KO
K05414
interferon alpha
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04060
Cytokine-cytokine receptor interaction
lroh04217
Necroptosis
lroh04620
Toll-like receptor signaling pathway
lroh04621
NOD-like receptor signaling pathway
lroh04622
RIG-I-like receptor signaling pathway
lroh04623
Cytosolic DNA-sensing pathway
lroh05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
127157650
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
127157650
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
127157650
04621 NOD-like receptor signaling pathway
127157650
04622 RIG-I-like receptor signaling pathway
127157650
04623 Cytosolic DNA-sensing pathway
127157650
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
127157650
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
lroh04052
]
127157650
Cytokines and neuropeptides [BR:
lroh04052
]
Cytokines
Interferons
127157650
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Interferon
Motif
Other DBs
NCBI-GeneID:
127157650
NCBI-ProteinID:
XP_050956859
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All DBs
Position
3:27678795..27680216
Genome browser
AA seq
181 aa
AA seq
DB search
MDLHRVALLCTFFCFAQVWSRPTNCILREDLLKRSYTVIETAGGLFPVQCLDENVVIPFP
QNAFEFDTSDQVTGVEKAIYQTLENIDALFESYSDPDREAEKWNEFRGLVYRQIVDSKCI
MNKSEAAQDFPSREASLKVYFKTITSTLKEKDFSYCAWEIVRKEILCTLKFILDHNSDII
L
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atggaccttcatcgtgtggccctgctgtgcacctttttctgctttgcgcaggtgtggtca
aggccaacaaactgcatccttcgtgaggacttgctgaagagatcctacacagttatagag
actgcgggggggcttttccctgtgcagtgcctggacgaaaatgttgtcatacctttcccg
caaaatgcgttcgagtttgacacctcggatcaggttactggtgtagaaaaagctatttac
cagacacttgagaatattgacgcactgtttgagagctacagcgatccagaccgggaagca
gaaaagtggaatgagtttcgaggactcgtgtaccggcagatagtggacagcaaatgcatc
atgaacaagtctgaagcggcacaggatttccccagcagagaagcttcactgaaggtttac
ttcaagactataacctcaactctgaaagaaaaggatttcagttactgcgcatgggaaatt
gtcaggaaagagattctctgcaccttgaagttcatactggatcacaactccgacatcatt
ttataa
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