Labeo rohita (rohu): 127157830
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Entry
127157830 CDS
T09007
Symbol
sgsm3
Name
(RefSeq) small G protein signaling modulator 3
KO
K20176
small G protein signaling modulator 3
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lroh04131
]
127157830 (sgsm3)
Membrane trafficking [BR:
lroh04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
127157830 (sgsm3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RUN
RabGap-TBC_2
SH3_1
SH3_2
SH3_9
Motif
Other DBs
NCBI-GeneID:
127157830
NCBI-ProteinID:
XP_050956996
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Position
3:17486434..17511771
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AA seq
756 aa
AA seq
DB search
MSTGNYTPAPGGPFSALTPSMWPQDILAKYFQKDPNMEAELQYDEFGFRIDSEDGNETRK
WQRGEGAPQREDPQQRLRWQAHLEFTHNHTVGDLTWDKISPTLARSDRLRTLVLGGIPHS
MRPQLWMRLSGALQKKRTSEISYREIVKNSSNDDTTAAKQIEKDLLRTMPTNACFSTLTS
VGVPKLRRVLRGLAWLYPDIGYCQGTGMVVSCLLLFLEEEDALWMMCALIEDLLPPSYFS
STLLGVQTDQRVLRQLIVQYLPSLDQLLQEHDIELSLITLHWFLTAFASVVDIRILLRIW
DLLFYEGSVVLFQVTLGMLKIKEEELVSSENSASIFNTLSDLPSQLEDGAEVLGEAVRLA
GSLSQENLDAHRHKHLAYILAEQAQLNSGNSHSLHTNLNKVVRRQSLRRKSTLSSLLWGE
DEVEALKAKNIKQTELVAALREAINRTAEHFHCLDPRNCSTDLTPDYSMESHQRDHENFL
VVSRNRRRRAKALLDFERHDDDELGFRKNDIITIVSQKDEHCWVGELNGLRGWFPAKFVE
VLDERSKEYSLAGDDTVTEAVNDLVRGTLCPALKAIFQHGLKKPSILGGPCHPWLFIEEA
ASREVERDFNSVYSRLVLCKTYRLDEDGKVLTPEELLYRAVQSVNMSHDAAHVQMDVKFR
SLICVGLNEQVLHLWLEVLCSSMSAVEKWYHPWSFLRSPGWVQIKCELRVLSKFAFSLSQ
DCELPTKKEEKEQRPLKEGVQDMLVKHHLFSWDIDG
NT seq
2271 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacaggtaattacactccagccccagggggccctttttcggccctcacacccagc
atgtggccccaggacattctggcaaagtattttcagaaagaccccaatatggaagcagaa
ctgcagtatgatgaattcgggttccggatcgatagtgaagacgggaatgagacaagaaaa
tggcagcgtggggagggagcccctcagagagaggaccctcagcaaagacttcgctggcaa
gcccatttggagttcacgcacaatcacaccgtaggagacctgacgtgggacaagatttcc
cccacactggctcgctctgaccgccttcggaccctggtgttgggtggcataccgcacagc
atgagaccacagttgtggatgcgtttgtcaggggccctgcagaagaagagaacatcagaa
atttcctacagggaaatcgtcaaaaacagctctaatgatgacaccacagcagccaaacag
atagaaaaggatcttttgcggaccatgcccaccaatgcatgcttcagcaccttgacgagt
gtgggggtgcccaagctcaggcgggtcctgagagggctggcgtggctgtatccagacatc
ggctactgtcagggcacaggcatggtggtatcctgtctgctgctgtttctggaggaagag
gatgctctgtggatgatgtgtgctctgatagaagacctactgcctccctcatacttctcc
tccacactgctgggagttcaaaccgaccagcgtgtgctcagacagctcatagtgcagtat
ctacctagtctagaccagctgctacaggagcacgatattgagctttctttaatcacactg
cactggttcctcactgcctttgccagtgtggtagacatccgcatcctgctgcgaatctgg
gacctgctcttttatgagggctcagtggtgctcttccaggttacactgggcatgctgaag
atcaaggaggaagagctggtatcatctgagaactcggcatccatcttcaacactctctca
gatctgcccagtcaactagaggacggggcggaagtgcttggagaggctgtacgtctggca
ggatctctgtctcaggaaaacctggatgcacacagacacaagcatcttgcctacatcctg
gcagagcaggcccagctcaactctggcaactcccattctctccacaccaacctcaacaag
gtggtccgcagacagagcctgcgtaggaaatccaccctgagctcgcttctctggggggag
gacgaggtggaggcactgaaggccaaaaacattaaacagacagagctggtggcagcactg
agagaagccatcaaccggaccgcagagcactttcactgcctggacccccgcaactgcagc
actgatttgactccggactattctatggagagccatcaaagggatcatgagaacttcctg
gttgtgtctcggaatcgtcggagacgagccaaagccttgctggactttgaaaggcacgat
gatgatgaactgggatttcggaagaatgacatcatcacaatcgtctcacagaaagatgaa
cactgctgggttggagagctgaacggcctgagaggctggtttcctgcaaaatttgtggaa
gtcttggatgaacgaagtaaagagtactctctggctggagatgacaccgtaactgaggca
gtgaatgacttggtcagaggcacgctttgtcctgctctcaaggccatctttcagcacggc
ttgaagaagccgtccatactgggaggaccctgtcacccatggctcttcatcgaggaggca
gctagcagagaagtggagagagacttcaactctgtttactccagactagtgctctgtaag
acctacaggttagatgaagatgggaaggtgctcacacctgaagagcttctgtacagggca
gtgcagtctgtcaacatgagccacgacgctgcacacgttcagatggacgtcaagttccgc
tcgctcatctgtgtgggcttaaatgagcaggtgctgcacctgtggctggaggtattgtgt
tcaagtatgagtgccgtggagaaatggtaccatccctggtctttcctccgcagtcctggc
tgggttcagataaagtgtgaactcagagttctctcaaagtttgccttcagtctctcccaa
gactgtgagctgcctaccaaaaaagaggagaaggagcagaggcctctaaaggaaggagtt
caggacatgctggtgaaacatcacctcttcagctgggacattgatggctaa
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