Labeo rohita (rohu): 127158143
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Entry
127158143 CDS
T09007
Symbol
thraa
Name
(RefSeq) thyroid hormone receptor alpha-A isoform X1
KO
K05547
thyroid hormone receptor alpha
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04080
Neuroactive ligand-receptor interaction
lroh04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
127158143 (thraa)
04081 Hormone signaling
127158143 (thraa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lroh03000
]
127158143 (thraa)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
lroh03310
]
127158143 (thraa)
Transcription factors [BR:
lroh03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
127158143 (thraa)
Nuclear receptors [BR:
lroh03310
]
1. Thyroid hormone like
1A. Thyroid hormone receptor (THR)
127158143 (thraa)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
127158143
NCBI-ProteinID:
XP_050957259
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Position
3:15125068..15173803
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AA seq
413 aa
AA seq
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MEHKEQELNLPEGDETRWPNGVKRKRKNSQCSMKSASVKIISVPGYVPSYLEKDEPCVVC
GDKATGYHYRCITCEGCKGFFRRTIQKNLHPSYSCKYDSCCIIDKITRNQCQLCRFKKCI
SVGMAMDLVLDDSKRVAKRRLIEENREKRKKEEIVKTLHNRPEPTVSEWELIRMVTEAHR
HTNAQGPHWKQKRKFLPEDIGQSPAPTSDNDKVDLEAFSEFTKIITPAITRVVDFAKKLP
MFSELPCEDQIILLKGCCMEIMSLRAAVRYDPESETLTLSGEMAVSREQLKNGGLGVVSD
AIFDLGKSLSQFNLDDSEVALLQAVLLMSSDRSGLTCVEKIEKCQEMYLLAFEHYINHRK
HNISHFWPKLLMKVTNLRMIGACHASRFLHMKVECPTELFPPLFLEVFEDQEV
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atggaacacaaagagcaggagcttaacctgccagagggagatgagacacggtggccgaat
ggagtgaagagaaaaagaaagaatagtcaatgctctatgaagagcgcgtctgtgaagatc
atctctgttccagggtatgttcctagctacctggagaaagatgagccatgtgtggtatgc
ggggacaaggccaccggctaccattaccgctgcatcacatgtgagggctgcaagggtttc
tttaggaggacaatacagaagaatctacacccttcctattcctgtaaatatgacagctgt
tgcatcattgacaaaatcacccgcaaccagtgccagttatgccgcttcaagaagtgcatc
tcggtgggcatggccatggacttggtgctggatgattcaaaacgcgtggccaagaggcgt
ctgattgaggaaaaccgggaaaagaggaagaaagaggagatcgtgaaaacactgcacaat
cgacctgaacccaccgtctcggagtgggagctcatccgtatggtgaccgaggctcatcgc
cacaccaatgcccagggtcctcactggaaacagaaacgcaagttcctaccagaagacatc
gggcagtctccagcccccacatcagacaacgacaaagtcgacctggaggccttcagtgag
ttcactaagatcatcacccctgccatcacacgagttgtggactttgccaaaaaactgccc
atgttctctgagctgccctgtgaagaccagattatcctgctgaaaggctgctgtatggag
ataatgtccttgcgtgcagcagtgcgatacgacccagagagcgagacgctgaccctgagc
ggagagatggctgtcagtcgagagcagctgaaaaatggaggcttaggagtggtatctgat
gccatctttgatttgggcaagagcctgtcacagttcaacctggatgactcagaggtggcg
ctgctgcaggctgtactgctcatgagctcagatcgctctggactgacgtgtgtggaaaag
atcgagaagtgtcaggagatgtacttgttagcattcgagcactacatcaaccatcgcaag
cacaacatctcgcacttctggcccaagctgctgatgaaggtgacgaacctgcgcatgatc
ggcgcctgtcacgccagccgcttcctgcacatgaaagtggagtgtcccacagaactcttc
cccccgctcttcctagaggtcttcgaggatcaggaggtgtga
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