Labeo rohita (rohu): 127158168
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Entry
127158168 CDS
T09007
Name
(RefSeq) LOW QUALITY PROTEIN: NLR family CARD domain-containing protein 3-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
lroh04054
]
127158168
Pattern recognition receptors [BR:
lroh04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
127158168
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
NLRC4_HD2
FISNA
PRY
NOD2_WH
SPRY
LRR_6
LRR_4
Motif
Other DBs
NCBI-GeneID:
127158168
NCBI-ProteinID:
XP_050957290
LinkDB
All DBs
Position
Unknown
AA seq
929 aa
AA seq
DB search
MHPPEFSDGTVTSDTVQEKTETVLQRDTLETVDLQRFKDQHKTSMKIKYERLFEGNKLQE
NETLPEQIYTQLYIIEGESEGVNEEHEVLQMEKTARTKHSQDTPIYCNDIFKSSPEPGCE
EKDQIKTVLTKGIAGIGKTVSVQKFILDWAEGKDNQDVDFMFVLPFRELNLIRDHQYSLH
RLLLDFHPELQDLDSKIYEECKVVFIFDGLDESRITLMFSDDQKVCDVTETSSVGVLMSN
LMKGELLPSALIWITSRPAAANQIPSKYINRLTEIQGFNESQKEEYFRKRISDQHQASRI
ISHIRRARSLHIMCHIPVFCWISSTVLQKLLKEDVSAEIPQTLTEMYIHFLLIQINMRNQ
KYEERDPEKLLQSNREVIVKLAEVAFKQLMKGNVMFYEEDLIESGIDITDASVYSGICTE
IFKEESVIHQRKVYSFIHLSVQEFLAAFYVFYYYVMINIDTLKFCDVMHNLHRDAVDKAL
ESENGHLDLFLRFLLGVSLESNQRLLQDLLTHTENSSESIRRTTQYIKEKIKDGHGLSTE
RSINLFLCLLEVKDQTLSREIQEFVKSDKHSEKKLSPAHCSTIAYMLQMSEEVLDELDLK
KYNTSDEGRRRLIPAVINCRKVILAGCNLTAQDCEIVSSALQSSNSVLRELDLSNNDLQD
SGVKIISDGLRSPNCQLEILRLSGCMVTEEGCGYLSSALSSNPSHLRELDLSYNHPGQSG
VQLLKHKLDDPNCSLQILNLEYGDPERIKPGLRKYACDLTLDPNTAHNQLILTERNRKAT
HVEDHQPYPEHPDRFEQHEQVLCREILTGRCYWEVEWSGWSYIAVTYKEINRKGGSESWF
GYNEKSWSLYCTDDRYFAWHDNKKTDIPAPSSSTRVGVYLDWSAGILSYFSVTDTHTLTH
IHTFNTTFTEPLYAGFRVFKSSLSLCQMK
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atgcacccccctgaattcagtgatggaacagtgacctctgacactgtgcaggaaaaaact
gaaacagtcctacagagagacacactggagactgtagatctgcagagattcaaagaccag
cacaaaaccagtatgaagatcaagtatgagagattatttgagggaaacaaactccaagag
aatgaaacccttcctgaacagatctacacacagctctacatcatagagggagagagtgaa
ggagtgaatgaagaacatgaggttttacagatggagaaaacagccagaacaaaacactca
caagacactccaatctactgcaatgacatctttaaatcctcacctgaaccaggatgtgag
gagaaagaccaaatcaagactgttcttactaaaggcatcgctggaatcggaaaaaccgtc
tctgtgcagaagttcattctggactgggccgagggaaaagacaatcaggatgtagatttc
atgtttgtgcttccatttcgagagctgaacttgatccgagatcatcagtacagtcttcac
agacttctgctggactttcatcctgaacttcaagatctggactcaaagatttatgaggag
tgtaaagttgtgttcatctttgatggtctggatgaaagcagaatcacactgatgttttca
gatgatcagaaagtttgtgatgtgactgagacttcatcagtgggtgtgttgatgtcaaac
ctcatgaaaggagagctgcttccctctgctctcatctggatcacctccagaccagcagca
gccaatcagatcccctccaaatacatcaaccgtctgacagaaattcagggattcaatgag
tctcagaaggaggaatatttcaggaagagaatcagtgaccagcatcaagccagcagaatc
atctcacacatcagaagagcaagaagcctccacatcatgtgccacatccccgtcttctgc
tggatctcatccactgtgcttcagaagctcctgaaagaagatgtgagtgcagaaatccct
caaactctgactgaaatgtacatccacttcctgctgattcagatcaacatgaggaatcag
aagtatgaagagagagatccagagaaactcctgcagtccaacagagaagtgattgtgaaa
cttgctgaagtggctttcaaacagctgatgaagggcaatgtgatgttctatgaggaggac
ctgattgagagcggcatagacatcactgacgcctcagtgtattctgggatttgcactgag
atctttaaggaggaatctgtgattcatcagaggaaagtctacagcttcattcatctgagt
gttcaggagtttcttgctgctttttatgtgttttactattatgtaatgataaatattgat
acattgaagttttgtgatgtgatgcataatctgcatagagatgcagtagataaagccctt
gagagtgagaatggacatctggatctgttcctgcggttcctgctgggcgtctcactggag
tccaatcagagactcttacaggatctactgacacacacagagaacagctcagagagcatc
aggagaaccacacagtacattaaagagaagatcaaagatggacatggactctccactgaa
agatccatcaatctgttcctctgtctgctggaagtgaaagatcagactctgtccagagag
attcaggagtttgtgaaatcagacaaacactcagagaagaaactctctcctgctcactgc
tcaacaatcgcctacatgcttcagatgtcagaggaggtgctggatgagctggacctcaag
aaatacaacacatcagatgaggggagaagaagactgataccagctgtgatcaactgcaga
aaagtcattcttgctggttgtaatctcactgctcaggattgtgaaatagtatcatcagct
ctacaatcctcaaactctgtcctgagagagctggatctgagtaacaatgacctgcaggac
tctggtgtcaagattatttctgatggactgaggagtccaaactgtcagctggagatactg
aggttgtctggctgtatggtgacagaggaaggctgtggttatttgtcttcagctctgagt
tcaaacccctcacacctgagagagctggatctgagctacaatcacccaggacaatcagga
gtccagctgctcaaacacaaactggatgatccaaactgctcactgcagatactcaatttg
gaatatggagaccctgagagaatcaaaccaggactgagaaaatatgcctgtgatctcaca
ctggatccaaacacagcacacaatcaactcatcctgactgagaggaacagaaaggcaaca
catgtcgaagatcatcagccatatcctgaacatccagacagatttgagcagcatgagcag
gttctgtgtagagagattctgactggacgctgttactgggaggttgaatggagtggatgg
tcttatatagcagtgacatataaagaaatcaacaggaaaggaggaagtgaatcttggttt
gggtacaatgagaaatcctggagtctgtattgcactgatgacagatattttgcctggcat
gataataagaaaactgacataccagccccttcatcctctaccagagtaggagtgtatctg
gactggtcagccggcattctctcgtacttcagtgtcactgacacacacacactcacacac
atacacacattcaacaccacattcactgaacccctctatgctggattcagagtgtttaaa
tcctcattgtctctatgtcagatgaaataa
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