Labeo rohita (rohu): 127158251
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Entry
127158251 CDS
T09007
Name
(RefSeq) NLR family CARD domain-containing protein 3 isoform X1
KO
K22614
NLR family CARD domain-containing protein 3
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
lroh04054
]
127158251
Pattern recognition receptors [BR:
lroh04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
127158251
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
NLRC4_HD2
FISNA
PRY
NOD2_WH
SPRY
LRR_6
LRR_4
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-GeneID:
127158251
NCBI-ProteinID:
XP_050957357
LinkDB
All DBs
Position
Unknown
AA seq
1004 aa
AA seq
DB search
MSSPSSESSCASLKSDQSLINHPLEFNDTVTSDTSVSRRSESPKPSCVSVKSNTSMDHPF
QFSEERVTSEPLKQIYEPVNLLPSFTSNYQTRIKKEGTKALLQTHTLETENLQRVKNQHK
TSMKKKFERLLEGIKLQKNETLLNRIYTQLYIIEEESEGVNEEHEVLQMEKTNRTKHSQD
TPIYCNDIFKSSPEPGCEEKDQIKTVLTKGIAGIGKTVSVQKFILDWAEGKDNQDVDFMF
VLPFRELNLIRDHQYSLHRLLLDFHPELQDLDSKIYEECKVVFIFDGLDESRITLMFSDD
QKVCDVTETSSVGVLMSNLMKGELLPSALIWITSRPAAANQIPSKYINRLTEIQGFNESQ
KEEYFRKRISDQHQASRIISHIRRAKSLHIMCHIPVFCWISSTVLQKLLKEDLSAEIPQT
LTEMYIHFLLIQINMRNQKYEERDPEKLLQSNREVIVKLAEVAFKQLMKGNVMFYEEDLI
ESGIDVTDASVYSGICTEIFKEESVIHQRKVYSFIHLSVQEFLAAFYVFYYHVSSTTEAS
LDSVHYLCKRAVDKALESENGHLDLFLRFLLGVSLESNQRLLQDLLTHTENSSESIRRTT
QYIKEKIKDGHGLSTERSINLFLCLLEVKDQTLSREIQEFVKSDKHSEKKLSPAHCSTIA
YMLQMSEEVLDELDLKKYNTSDEGRRRLIPAVINCRKALLAGCNLTAQDCEIVASAIQSS
NSVLRELDLSNNDLQDSGVKIFSYGLKSLNCQLEILRLSGCMVTEEGCGYLSSALSSNPS
HLRELDLSYNHPGQSGVQLLKHKLEDPNYKLQILNLEHGGHLQVRPGLRKYACDLTLDPN
TAHTQLILSKGNKTAKCENDHQPYPDHADRFKPYEQVLCRESLTGRCYWEVEWSGSGHIA
VTYKGINRKEGSDCRFGRNEKSWSLFFCDKMYTFWHNNETKDILAPLPSSKKTGVYVDVS
AGTLSFYSVSDKHTLTHLHTFNNTFTEPLYAGFTVYPNSSVSLS
NT seq
3015 nt
NT seq
+upstream
nt +downstream
nt
atgagttctccatcttctgaatcaagctgtgcatcattgaagagtgatcaatcattgatt
aatcatccacttgaattcaatgatacagtgacctctgacaccagtgtcagcaggagatca
gagtctccaaaacccagttgtgtgtctgttaagagtaacacatcaatggatcacccattt
caattcagtgaggaacgggtgacctctgaacctctaaagcagatatatgagccagtcaat
ttattgccgtcctttacatccaactatcagactcgcattaaaaaggaaggaactaaagcg
ctcctgcagacacacacactggagactgaaaacctacaaagagtcaaaaaccagcacaaa
accagcatgaaaaagaagtttgagagattacttgagggaatcaaactccaaaagaatgag
accctcctgaacaggatctacacacagctctacatcatagaggaagagagtgaaggagtg
aatgaagaacatgaggttttacagatggagaaaacaaacagaacaaaacactcacaagac
actccaatctactgcaatgacatctttaaatcctcacctgaaccaggatgtgaggagaaa
gaccaaatcaagactgttcttactaaaggcatcgctggaatcggaaaaaccgtctctgtg
cagaagttcattctggactgggccgagggaaaagacaatcaggatgtagatttcatgttt
gtgcttccatttcgagagctgaacttgatccgagatcatcagtacagtcttcacagactt
ctgctggactttcatcctgaacttcaagatctggactcaaagatttatgaggagtgtaaa
gttgtgttcatctttgatggtctggatgaaagcagaatcacactgatgttttcagatgat
cagaaagtttgtgatgtgactgagacttcatcagtgggtgtgttgatgtcaaacctcatg
aaaggagagctgcttccctctgctctcatctggatcacctccagaccagcagcagccaat
cagatcccctccaaatacatcaaccgtctgacagaaattcagggattcaatgagtctcag
aaggaggaatatttcaggaagagaatcagtgaccagcatcaagccagcagaatcatctca
cacatcagaagagcaaaaagcctccacatcatgtgccacatccccgtcttctgctggatc
tcatccactgtgcttcagaagctcctgaaagaagatctgagtgcagaaatccctcaaact
ctgactgaaatgtacatccacttcctgctgattcagatcaacatgaggaatcagaagtat
gaagagagagatccagagaaactcctgcagtccaacagagaagtgattgtgaaacttgct
gaagtggctttcaaacagctgatgaagggcaatgtgatgttctatgaggaggacctgatt
gagagcggcatagatgtcactgacgcctcagtgtattctgggatttgcactgagatcttt
aaggaggaatctgtgattcatcagaggaaagtctacagcttcatccatctgagtgttcag
gagtttcttgctgctttttatgtgttttactaccacgtaagcagcacaacagaagcatct
ttagattcagtgcattatttatgtaaaagagcagtagataaagcccttgagagtgagaat
ggacatctggatctgttcctgcggttcctgctgggcgtctcactggagtccaatcagaga
ctcttacaggatctactgacacacacagagaacagctcagagagcatcaggagaaccaca
cagtacattaaagagaagatcaaagatggacatggactctccactgaaagatccatcaat
ctgttcctctgtctgctggaagtgaaagatcagactctgtccagagagattcaggagttt
gtgaaatcagacaaacactcagagaagaaactctctcctgctcactgctcaacaatagcc
tacatgcttcagatgtctgaggaggtgctggatgagctggacctcaagaaatacaacaca
tcagatgaggggagaagaagactgataccagctgtgatcaactgcagaaaagctcttctt
gctggctgtaatctcactgctcaggattgtgaaatagtggcatcagctattcagtcctca
aactctgtcctgagagagctggatctgagtaacaatgacctgcaggattcaggagtgaaa
atattctcttatggactgaagagtctaaactgtcagctggagatactgcggttgtctggc
tgtatggtgacagaggaaggctgtggttatttgtcttcagctctgagttcaaacccctca
cacctgagagagctggatctgagctacaatcacccaggacaatcaggagtccagctgctc
aaacacaaactggaggatccaaactataaactgcagatactcaatttggaacatggagga
catttacaggtcagaccaggactgagaaaatatgcttgtgatctcacactggatccaaac
acagcacacactcaactcatcctgtctaaggggaacaaaactgcaaaatgtgaaaatgat
catcagccatatcctgatcatgcagacagatttaagccttatgagcaggttctgtgtaga
gagagtctgactggacgctgttactgggaggttgaatggagtggctcaggtcatatagca
gtgacatataagggaatcaaccggaaagaagggagtgactgtcgatttggacgcaatgaa
aagtcctggagtcttttcttttgtgataagatgtacactttttggcacaataatgagacc
aaagacattcttgcccctttaccctcctctaaaaaaacaggagtgtatgtggacgtgtcg
gccggcactctgtccttctacagcgtctctgacaaacacacactcacacacttacacaca
ttcaacaacacattcactgaacccctctatgctggatttacagtttatcctaattcttca
gtgtctctgagttag
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