Labeo rohita (rohu): 127158312
Help
Entry
127158312 CDS
T09007
Name
(RefSeq) E3 SUMO-protein ligase ZBED1-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lroh03000
]
127158312
04121 Ubiquitin system [BR:
lroh04121
]
127158312
Transcription factors [BR:
lroh03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
127158312
Ubiquitin system [BR:
lroh04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
127158312
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dimer_Tnp_hAT
zf-BED
hAT-like_RNase-H
Motif
Other DBs
NCBI-GeneID:
127158312
NCBI-ProteinID:
XP_050957430
LinkDB
All DBs
Position
Unknown
AA seq
605 aa
AA seq
DB search
MAGALVPKPNVTSPVWEHFGFQPNEKGEPANLDEPICKICGKKVPVTRGNTSNLRCHLAN
CHPAIEAQLPLPASGRGATSKRTAEAGTSRQLGVAEAFAKSVRYNRESNRYKCLTAAVTQ
YLVEEMVPFNTVEKPAFKSMLQKFDKQYELPGKTYFSETAVPKMYNTVKTSIKMELMNAD
YFSATTDMWSSVNMIPYMSLTVHYLSMEWTLKSHCLETVFMPENHTSDNISDALRHAFEE
WSLDEKKLTCITTDNGANIVAAVKKLNWPWLNCFGHNLHLAVTNAMASVKDRTARAMGLC
HTLVSTFSHSWLKRRDLAKAQAELQIPQHSLILDCATRWGTKQKMVDRVLEQIPAIRRVL
GHRRHHHLNPSWQDIAVLESVNAALKPAAEFTDLLSGESYVTVSSVKPVLKLLTEDMLKP
SNEDTTLTSDIKHKMCSVLQGKYEPAALQELLEKACFLDPRYRGDYINDTETKSKLIEEM
VGVEDEGSAASASVVGDEEQAVVPPAAKKKTLGDLLKSRTTSASAPIPKRVRADNELTRY
LQEECIDSNANPLSWWRDNQSRYPLLSKVARKYMCICATSTPSERVFSAAGNIVTPMRSS
LKPHK
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atggcaggcgctctcgtcccaaaacctaatgtcacgtcgccagtttgggaacatttcggc
tttcaacccaatgaaaagggtgagccggcaaatttagatgaaccgatttgcaaaatttgt
ggcaaaaaggtccctgtgacacgcggcaatacatctaatttgcggtgtcatctcgctaac
tgtcatccagccattgaagcgcagctgcctcttccagcatcaggtcgcggagcaacatca
aaaagaacagctgaggccggtactagccgacagttaggagtagctgaagcctttgcgaaa
tcggtcagatacaaccgtgaaagtaaccggtataaatgtcttacagccgctgttacacag
tatctagttgaggagatggttccattcaatacagtggagaaacctgcattcaagtcaatg
cttcaaaaattcgacaagcagtacgagttgccgggcaaaacctacttttcagagactgct
gtgccgaaaatgtacaacactgtaaagacatcgatcaaaatggagcttatgaatgctgac
tacttttctgccacaacagatatgtggtcaagtgtcaatatgattccttatatgagtcta
acggttcattacctcagcatggaatggactctgaaatcacattgcctcgaaacagtgttt
atgcccgaaaaccacacgtccgacaacatttcagatgctcttcggcacgcatttgaagag
tggtccctagatgagaagaagttgacctgtatcactacagacaacggggccaacatcgtt
gcagcagtcaaaaagttgaactggccgtggctgaactgctttggtcacaatttacatttg
gcagttacaaacgcaatggcaagcgttaaggaccgcactgctcgagcaatgggtctgtgt
cacaccttggtcagtacattttctcatagctggttgaagagaagagatctggccaaagca
caagcagaacttcagatccctcaacatagcctcatactggactgcgctactagatggggc
accaaacagaaaatggtggacagggttttggagcaaatcccggctatcagaagagttttg
ggtcaccggcgacaccaccatctaaatccaagctggcaggatatcgctgtacttgaatcc
gtgaatgcagcacttaaacccgcggctgagtttacggatctgctgtctggcgagagctac
gttacagtgtcttcagtcaaacccgtcctgaaactcctgacagaagatatgcttaaaccg
tcaaatgaggacaccacattaacatcggacataaagcacaaaatgtgcagtgttctacag
gggaagtatgaaccagctgccttacaagaacttttggaaaaggcctgttttttagatcct
cgatataggggtgattatatcaatgatacggagacaaaatccaaactcatcgaagagatg
gtgggagtggaggacgaagggagcgctgccagtgcgtcagtggttggagacgaagagcaa
gcggtggtgccacctgcagcaaagaaaaagactctcggagacctgctgaagtcacggaca
acctctgcgtcagcgcccatacccaagagagtgcgagcagataacgagctcacgcgctac
ctgcaggaagaatgcatagactccaacgcgaacccactgtcctggtggcgcgataatcag
tctagatatccgctgctgtctaaagtcgcgcgcaaatacatgtgtatttgtgcaacgagc
acaccgtcggaaagggttttcagtgccgccgggaatattgttacccccatgcgatcctcc
ctgaaaccacataag
DBGET
integrated database retrieval system
