Labeo rohita (rohu): 127158571 Help Entry 127158571         CDS       T09007                                  Symbol casc3 Name (RefSeq) protein CASC3 isoform X1   KO K14323   protein CASC3 Organism lroh  Labeo rohita (rohu) Pathway lroh03013   Nucleocytoplasmic transport lroh03015   mRNA surveillance pathway Brite KEGG Orthology (KO) [BR:lroh00001]  09120 Genetic Information Processing   09122 Translation    03013 Nucleocytoplasmic transport     127158571 (casc3)    03015 mRNA surveillance pathway     127158571 (casc3)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:lroh03019]     127158571 (casc3) Messenger RNA biogenesis [BR:lroh03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     EJC complex      127158571 (casc3) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Btz Motif Other DBs NCBI-GeneID:  127158571 NCBI-ProteinID:  XP_050957612 LinkDB All DBs Position 3:complement(28481592..28498772) Genome browser AA seq 758 aa AA seqDB search MADRRRRRRRASQDSEEEDESASGSESGRSFSASRKTRGRDPEPVESPAERVAAKSDAES ECESEDGVGEAVLSDYDSADLEENGSHTEGGEDEEEGEHFSDEEASRPAAEPKPAADAPT QELGEEEERDEGGKEVKADEKGNLAGERQSGDGQESTEDPENKSGSKGQKLDDDEDRKNP AYIPRKGLFFEHDVRGQATEEERPKGRHRKLWKDEGRWEHDKFREEEQAPKSREELIAYY GYDIRNGTGPSDGRSYRSRKPRHAGSPSREPRRHRDGEKSVRTTWQGPSPGHRNPPQSVT LQSGPPPGPPAAPKPSGRLSNQPPQRSFQSSRAPTAPHRTEGQRHSKPSLDGPPPRGMRP QPVEGERGPRLRGRGLHAVHADRSPALVVEDIRSEEEEEEGEIPLATTTYTAHHYKTERE RVPSPRKQESGPAMEGGSAAGQVRESSPPQERPVEKKSYSLARRATRTRPSDLGKQASLD ESSPTVQQTPAAAKSESWQEQSDTGTQGGLTGLDQDLARLSLAGQNWAQSPPSYLQAEMR GIRSSMHMAGGPPQYGNMEDMGVGGGRAKRYSSQRQRPVPEPAPMHIGVMEGHYYEPMSF QGPIYTHGDSPAALPPQGMLVQPEMHLPHPTHPGHPGLHPHQSGGPMPNPALYAAPPVSL SPGQPPPQQLLPPPFYPPPGVMTFGNTNYPYPAGATLPPMYPNPQAQSQVYGGVTYYDTV QQQAQPKRSPPRRSSHPVTVRPPPPEDQSRKPAEEIRS NT seq 2277 nt NT seq  +upstreamnt  +downstreamnt atggcggaccggcggcgacggagacggcgcgcctctcaggacagtgaggaggaggacgag tccgcctcgggctccgagagcgggagatccttctcggccagccggaagactcgcggaaga gatcccgagccggtcgaatcgccagcggagcgcgtcgccgccaaaagcgacgctgagtcg gagtgtgaaagtgaagatggtgttggagaagcagtcttatcagactatgacagtgctgat ctggaggagaatggatcgcacacggagggaggagaggatgaggaggagggagagcatttc agtgatgaagaggcctcacgtcctgccgcagaaccgaagcctgctgcagacgccccgaca caagagcttggtgaagaggaggagagagatgaaggtggcaaagaagttaaagctgatgag aaggggaatctagctggggagcggcagagtggggacggacaggaaagcactgaggaccct gagaataaatcaggcagcaaaggccagaagctggatgatgatgaggacaggaagaatcca gcctacatcccccgaaaaggccttttcttcgagcatgatgtgagaggtcaggctacagag gaggagagacctaaaggcaggcacaggaagttgtggaaagacgagggccgatgggaacac gacaagttccgcgaagaggagcaggcgccaaaatcacgcgaagagctaattgcttactat ggttatgacatccgcaatggcacaggtccgagtgacggacgatcgtaccgctcccgaaaa cccagacatgctggttcgcccagtcgggagcctaggcgccatcgtgatggtgaaaaatca gtgcgtacaacatggcaggggccttcacctggccaccgcaatccccctcagtctgttacc ctacagtcaggcccaccacctggtccccctgcagcacccaaaccctccggccgactctca aatcagcctccccagcgcagcttccaaagcagtcgagccccaacggccccccacaggaca gaagggcagagacactcgaagcccagtctagacggcccgccacctcgaggaatgcggcca cagcctgtagagggtgagagaggaccgcggctcaggggtcgtggtttgcatgctgttcac gctgaccgtagcccggccctggtggtggaggacatccgcagtgaggaagaagaggaggag ggtgagattccattagcgacaactacatataccgctcaccactacaagacggagagagag cgggttccgtcaccacggaaacaagagtcgggcccagcgatggaagggggtagtgcagct ggtcaggtgcgagaatcgtctcctcctcaagagaggccggtggaaaagaaatcgtactcg cttgcacggagggcgacgcgaacgcggccgtctgatctcggtaagcaggcgtcgttagat gagtcttcgcccacggtccagcaaaccccggcggcagcaaagagcgagtcttggcaagag cagagtgatacgggcacacaaggtggactgacagggcttgaccaggacctggcccgactc agcctggcggggcagaactgggcgcaaagcccaccctcctaccttcaagctgagatgaga ggcatccgtagctcaatgcacatggcaggaggccctccacagtatggaaacatggaggat atgggtgttggtggtggccgggctaagcgatattcatcacagcgccagaggccagttcct gagcctgcacccatgcacataggagtcatggagggccattattatgaacccatgtcattc cagggaccaatctatacacatggggacagcccagcagccctgcctcctcaaggcatgctt gttcagcctgagatgcacctgccacaccctacccaccccggacacccaggcttgcacccg caccagtcgggagggcccatgcccaatccggctctttacgcagccccacccgtttcgctg tcacctgggcaaccgcctcctcagcagctgctacccccacccttctacccccctccaggt gtcatgacctttggcaacaccaactacccgtaccctgccggagctacgctacctccaatg taccccaacccccaggcacagtcacaagtctacggtggtgtgacgtactacgacacggta cagcagcaagctcagcccaaacgctcccctccccgacgctcctctcatcccgttacagtc agacctccccctcctgaggaccagagcagaaagcccgctgaggagattcgctcctag

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