Labeo rohita (rohu): 127158890
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Entry
127158890 CDS
T09007
Name
(RefSeq) E3 SUMO-protein ligase ZBED1-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lroh03000
]
127158890
04121 Ubiquitin system [BR:
lroh04121
]
127158890
Transcription factors [BR:
lroh03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
127158890
Ubiquitin system [BR:
lroh04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
127158890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dimer_Tnp_hAT
zf-BED
DUF659
hAT-like_RNase-H
Motif
Other DBs
NCBI-GeneID:
127158890
NCBI-ProteinID:
XP_050957811
LinkDB
All DBs
Position
Unknown
AA seq
629 aa
AA seq
DB search
MAENNKKQIKDPPASFHSKVWRHFGFYETVDGKALDKDYAICKNCFAKIKYNSNTTNLQM
HLVRYHGELLSGDNEGKPSQPTIATAFKAKLPFGLPRAESITKSIAEFICKDLRPYSVVE
NDGFCRMLATLEPRYEIPSRRHFTDKVIPALYADTRAKVEGALRSAKRVALTCDGWTSRA
TESFVTITAHFIDDNWDAQSYVLQTRAMNDSHTGAHMAEVLKKAADEWKLTEKEPAVVTD
NAANMSVAVEIAGYPHIRCFAHVLNLAVQRALKLPNVARLLGRIRRICTFFHRSTSAAEA
LKRNQKMLGLPHHKLITDVVVRWNSAYEMISRFLEQQPAVTAALLSPEVRKNTTDISTLT
DGDIRNAEEVVKALHPMLVATKSMCEEKSPTVSIIAPLHAQLLSDTLSTIEDAPLVKDIK
CAIHGDLSKRYMSAEEKNFLYVASALDPRFKSMLFLSPSEVQETYAMVVSKAAALMGNAD
VGMQSDGNVEEGGSTEESGPADDTSDEDRPPHTPKKRRSALANLLGQTFQHVRSSLTPSS
PNSKAEKEVQQYQESSPLPLSDEPLGWWKSEACKYPHLAKLAQRYLCVPGTSVPSERIFS
TTGDIISAQRCALTSEHADQLVFLKKNMP
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaaataataaaaaacaaatcaaagacccacccgctagtttccactctaaagtg
tggagacacttcgggttttatgagacagtcgacggaaaggcactggataaagactatgca
atctgcaagaactgctttgcaaagataaaatacaacagcaacactacaaatctgcaaatg
cacctcgttcgctatcacggtgaactactctcgggtgataatgagggcaaaccaagtcag
ccgacaatcgctactgcattcaaagcaaagctcccctttggtttgccgagggcagagagt
atcactaagtccatcgccgaatttatttgcaaggaccttcgcccttacagcgtggtcgag
aatgatggattttgcagaatgttggcaacactggaaccgagatacgagataccgagtcgt
cggcactttacagacaaagtcatccctgcattgtatgcagataccagagccaaagtggag
ggtgcgctccggtctgctaaacgagttgcattaacctgtgatggttggacatcaagggcc
accgagtccttcgtaactattactgcccacttcatagacgacaactgggatgcccaaagc
tacgtccttcagactcgggctatgaatgacagtcatactggtgctcacatggcagaggtg
cttaagaaggctgcagacgagtggaagctcaccgagaaagagccagcagtggtgactgac
aacgcagcgaatatgtccgtagctgttgagattgctggatatccgcacattcgctgtttc
gctcatgttttgaatctcgcggtgcagcgtgccctcaaactgccaaatgtcgctcgactg
ctcgggagaattaggagaatttgcacattcttccacaggagcacctcagcagctgaggcc
ctgaagaggaaccagaagatgttaggccttccgcaccacaagctgataactgatgttgtt
gtccgctggaacagtgcctatgagatgatcagccggtttcttgagcaacagccagctgtt
actgctgccctcttatctccagaggtcagaaagaataccactgacatctctaccctgact
gatggagacatcaggaatgccgaagaggttgtgaaagccctccatccaatgctggtagca
acaaagagcatgtgtgaggagaaaagcccaactgtttccatcattgctcctcttcacgcc
caacttctgagcgacacactcagcacaattgaggatgcccctctcgtcaaggacataaag
tgtgccatccatggagacctatcaaagcgctacatgtctgcagaggagaaaaacttcctc
tacgttgcctccgccttagaccccaggtttaagtcgatgctcttcttgtcgccctcagaa
gtgcaggagacgtatgccatggtggtgtccaaggctgctgccctgatggggaatgcagat
gtgggaatgcagtctgatggtaatgtagaggagggaggaagcactgaagagagtggtcct
gctgatgacaccagtgatgaggaccgaccaccacacacaccaaaaaaaaggagatccgca
cttgcaaacctccttggacaaacattccagcatgtcagatcttccctgaccccatcgtca
cctaactccaaggctgaaaaggaggttcagcaatatcaagaatcctcacctctaccactg
tcagatgagccgttgggttggtggaaatctgaggcatgcaagtacccacaccttgccaag
ctggcccagaggtacctgtgtgtgccagggactagcgtgccatcagagagaatcttttct
accaccggtgacataatctctgctcagaggtgtgctcttacatctgagcatgctgatcag
ttagtgttcctcaagaagaatatgccttga
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