Labeo rohita (rohu): 127159005
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Entry
127159005 CDS
T09007
Symbol
nlrp3l
Name
(RefSeq) LOW QUALITY PROTEIN: NACHT, LRR and PYD domains-containing protein 1 homolog
Organism
lroh
Labeo rohita (rohu)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
NLRC4_HD2
FISNA
NOD2_WH
nSTAND3
AAA_16
Herpes_U59
AAA
SopA
AAA_7
Motif
Other DBs
NCBI-GeneID:
127159005
NCBI-ProteinID:
XP_050957916
LinkDB
All DBs
Position
Unknown
AA seq
668 aa
AA seq
DB search
MDAFHSISRSHAGSNVSAAAQSRSHITAPALTNNTIKGNVHIIHNAPGFTWYRPHSEKKK
SAITSLIFKHKTRICSEYQYVTEYNSLPGEQVLLSERFTQPLILQKHRDQKEREEELRSS
GEDFQQVLSSRSSDESVHLNSLFNPDHHGISPSAVILQGNSGNGKTLTVQKIMLDWASDK
LYKERFDIVFHLKCKEINRIPGEKSLVEILSYSCSLTSHQISQILQQSQEKVLFIIDGFD
ELRLTQDIYDMSPHTDVIQKAPAEVTLCALLRGHILPESFLLVTTRSTATDKLSQLLKGP
KNFTEIMGFSEKGVEEYFQKFFQNDELFRKAYTFVKTNENLFTTCSIPVICWIICTTIKE
RFEFGADVTSGLETTTSIYVDFMFTLLEHHCQGLNQSVPNLLRSLGQLAERGMLEQQVLL
DEKXVYETISDPAANPFLCKFLFKRRIHQETMFSFMHLSFQEFFTALYYLILDKEESQKK
ITELYPSHAPEFYLYQSSPPRFAAVVQFAFGLLNKDVRHMLRNKHGLFVHPNTQALLKEW
ILEDLQRDIQNYRTLFIFHCLYELHEEDFVIKAMKSWNKINAYGAVFRRTDCWALLYCSQ
CCQCMEELDLLDCILTSEKLMMILPALPKFKKLTLPLMDQSDSDLVELMCALTRGQTLNS
AGVYVSSP
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atggacgctttccacagcatttccagatcgcatgctgggtcaaatgtcagtgctgcagct
cagagtagaagccatattacagcacctgcactcactaacaatacaataaaaggcaatgtc
cacatcatacataatgcacctggtttcacttggtatcgcccacactctgaaaaaaaaaag
tcagcaataacatcactgattttcaaacataagacacggatctgcagtgagtatcagtat
gtgactgagtataactctcttcctggtgaacaagtgctgctgtctgaacgcttcacacaa
cctctgatccttcagaaacatagagatcaaaaagagagagaagaagagctccgctccagt
ggagaggacttccaacaggtcctcagctccaggagcagtgatgaatctgtccatctgaac
tctctgttcaacccagatcaccatgggatcagtcctagtgctgttatactgcagggaaac
tcagggaatgggaagaccctaactgtgcagaagatcatgctggactgggcatctgataaa
ctctacaaagagcggtttgatattgtgttccacctaaagtgtaaagaaataaaccgcatt
cctggcgaaaagagtttggtggagatcttgagctacagctgcagtttaacatcacatcag
atctcacagatactacagcagtcacaagagaaggtgcttttcattattgatggatttgat
gagttgagactcacacaggacatttatgacatgtctcctcacactgatgtgattcagaaa
gctccagctgaggtcacactttgtgccctgttgaggggtcacatcttgccagagtccttc
ctcctggtcaccaccagatctacagctacagacaagttgagtcagctgctcaaagggcct
aaaaattttactgagattatgggtttctctgagaagggggtggaggagtacttccagaag
ttctttcaaaatgatgaactcttcaggaaggcttatacatttgtgaagacaaatgaaaac
ctcttcaccacctgctccatccctgtcatctgctggatcatctgcacaactataaaggaa
cgtttcgaatttggtgcagatgtaacaagtggactggaaaccaccacctccatctatgtt
gactttatgttcactctgctggagcatcactgccagggtttgaatcagtctgtcccgaac
ctgctgaggagtcttggtcagctggcagagagagggatgctggaacaacaagtcttgttg
gatgaaaaancagtttatgaaacaatttcagaccctgctgccaatccatttctgtgcaag
tttctctttaagagaagaatccaccaggagacgatgtttagtttcatgcatctcagcttt
caagagttcttcactgctctctactatctcattctggataaagaagagtctcagaagaaa
ataacagagttatatcccagtcatgccccagaattttatctatatcaaagtagtcctcca
cgttttgcagctgtggtgcagtttgcttttggtctgttgaataaggatgtgagacacatg
cttaggaataaacatggtctgtttgttcacccaaacacacaggcccttcttaaagaatgg
attttggaagatctccaaagagatattcagaattatagaacactttttatttttcactgc
ctctatgaacttcatgaagaggactttgtgataaaagctatgaaatcatggaataagatt
aatgcatatggtgcagtctttagaagaacagactgctgggctctgctgtactgctctcag
tgctgtcagtgcatggaagaactggatcttcttgattgcatactgacatctgaaaagttg
atgatgattctgcctgcactccccaagtttaagaaattaactttgcctctaatggatcaa
tcagactctgatcttgttgagctaatgtgtgctctgacgagaggacagacactgaactca
gcgggtgtttatgtctcatccccataa
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