Labeo rohita (rohu): 127159414
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Entry
127159414 CDS
T09007
Symbol
samd1a
Name
(RefSeq) sterile alpha motif domain containing 1a isoform X1
KO
K26266
sterile alpha motif domain-containing protein 1
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lroh03036
]
127159414 (samd1a)
Chromosome and associated proteins [BR:
lroh03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Other PRC associated proteins
127159414 (samd1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAMD1_WH
SAM_1
SAM_2
SAM_PNT
Motif
Other DBs
NCBI-GeneID:
127159414
NCBI-ProteinID:
XP_050958203
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All DBs
Position
3:4632349..4643702
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AA seq
373 aa
AA seq
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MSEPYREWILGSIDSLRSRKARPDLDRICRMVKRRHGSDWDRTRSELEKLIEEQTVLKVN
YKGSVSYRNAAKVLRGRRKTEQSKCAVKQPSLADWSTGDSALGPVDEDHMEDMEDEMSTT
AGMDSSMDEEGDESSLDAMCAQSTADSGISMSPITSSSTSQPLPSPTSSKNSPTHDALRQ
DADSAYILPEHIQPAAQQDTGSVTLVQQPAAICLSTLQVEEGPRAEESVLTPHPLLSDCA
ATPDEAVMSDGGPHAASDPVEEGEMSTKSTTEEETVNNGGVNNGNDVVKKEIGQDPLLWS
VADVASYFTSVGFPEQALAFRTQEIDGKSLLLMQRSDVLTGLSIRLGPALKIYENHVKVL
QRSHFQDDSRLFS
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atgtccgagccgtaccgcgaatggatcctgggctccatagactcactgaggtcgagaaaa
gcgcgaccggacctggacagaatttgcagaatggttaaaagacgacacggctcggactgg
gaccgaacccggtcagaactagagaaactgatagaggagcaaacggtgctgaaagtcaac
tacaaaggctcggtttcctatcgcaacgctgcaaaggtgctaagaggcaggaggaaaacc
gagcagagcaagtgtgcggtgaaacagccttctctcgcggactggagcaccggcgacagc
gctctcggtcccgtggatgaggatcacatggaggacatggaagacgagatgtccacgaca
gcaggaatggacagcagtatggacgaggagggggatgagagcagtctggacgccatgtgc
gctcagagcaccgctgactcgggcatcagcatgagtcccatcaccagcagtagcaccagt
cagcctcttccctcacccacgtcctcaaagaactctcctacccatgatgctctgaggcag
gacgccgacagcgcttacattctacctgagcacatacagccagcagcccagcaggataca
ggatctgtgacgctcgtgcagcaaccggcagccatctgtctctctactcttcaagtcgag
gaggggccgagggcggaggagagcgtgctcacccctcatccgttgctgtcagactgtgca
gccacgccggacgaggcggtgatgtcagatggagggcctcatgctgcatctgatcctgtc
gaggagggtgaaatgtccaccaagagcacaacagaggaagaaactgttaacaatggaggg
gtgaataatggaaatgatgtggtaaagaaagaaatcgggcaggaccctttgctttggagc
gtggccgatgtggccagttacttcacatctgtgggattccctgagcaggcgctggctttc
aggacacaggaaatagatgggaagtccttactgctgatgcagcgcagcgacgtgttgacc
ggtctgtcgatcagactcggccctgcacttaaaatctatgagaatcatgtgaaggtactg
cagagaagccactttcaggacgacagccgtctcttctcatag
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