Labeo rohita (rohu): 127159477
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Entry
127159477 CDS
T09007
Symbol
capn2l
Name
(RefSeq) calpain 2, (m/II) large subunit, like
KO
K03853
calpain-2 [EC:
3.4.22.53
]
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04141
Protein processing in endoplasmic reticulum
lroh04210
Apoptosis
lroh04217
Necroptosis
lroh04218
Cellular senescence
lroh04510
Focal adhesion
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
127159477 (capn2l)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
127159477 (capn2l)
04217 Necroptosis
127159477 (capn2l)
04218 Cellular senescence
127159477 (capn2l)
09144 Cellular community - eukaryotes
04510 Focal adhesion
127159477 (capn2l)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lroh01002
]
127159477 (capn2l)
Enzymes [BR:
lroh01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.53 calpain-2
127159477 (capn2l)
Peptidases and inhibitors [BR:
lroh01002
]
Cysteine peptidases
Family C2: calpain family
127159477 (capn2l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_6
EF-hand_1
CAPN13-like_C_EFh
EF-hand_8
EF-hand_7
Motif
Other DBs
NCBI-GeneID:
127159477
NCBI-ProteinID:
XP_050958242
LinkDB
All DBs
Position
Unknown
AA seq
700 aa
AA seq
DB search
MSGIAAKLQQNRARAAGVGTNAQAVKFLNQDYEALKRECLESGRLFQDDTFEASTSALGF
KELGPNSSKVRGVEWLRPKQLTSNPSFISGGASRTDICQGALGDCWLLAAIASLTLNQDV
FARVVPPEQNFDSDYAGIFHFQFWQFGEWVDVVIDDRLPTRNKELLFVHSAEGSEFWSAL
LEKAYAKVNGCYEALSGGTTTEGFEDFTGGIAEVHELAKAGPNLFKVIQKALSWGSLLGC
SIDITNSADSEAITSQKLVKGHAYSVTGADEVEYRGNLTKLIRIRNPWGQVEWTGAWSDG
SSEWRQISDADRERLSCKAEDGEFWMAFSDFLRLYSRVEICNLTPDALSDESLNKWALSK
FDGNWRNGSTAGGCRNYPNSFWMNPQFLIKLEEQDDDPTDNEVGCSFVVGLIQKNRRKMR
KVGEDMHTIGFAIYEVPDEIAGQRNVHLDRNFFVRHASAARSETFINLREVCSRFCLPPG
EYLIVPSTFEPNKDGDFCVRVFSEKQAEFQELDDPVDCNVPEINVNEGDIDSRFKNLFGQ
LAGADAEISAFELQNILNKVISKRKDIKTDGFSLDTCRNMVNLLDKDGSGKLGMVEFKIL
WTKIEMYLDIFCKNDKDKSGTMSSMEMREAIGKAGFSLNNPLHQILVARYSDSNLTIDFD
NFVGCIMRLECMFKTFKMLDKNKAGTVELNFSEWLNFAML
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggaattgcggcgaagcttcagcagaaccgagcgagagcagcgggcgtcggtacc
aacgctcaggcggtcaaattcctcaaccaggactatgaagcgctcaaacgcgagtgtctg
gagagcggacgcctgtttcaggatgacacgtttgaagccagtacatctgccctggggttc
aaggaactgggaccaaactcatccaaagtgcgcggggttgagtggctgagaccaaagcaa
ctgacatccaacccatcgttcattagtggaggagcgagcagaactgacatctgccagggt
gctttgggtgactgttggcttctagctgccatcgcttctcttaccctcaaccaggatgtg
ttcgcccgtgtggtcccgcctgaacagaattttgacagtgactacgctggaatatttcat
ttccagttctggcagtttggtgaatgggtggatgtggtcattgatgaccgtctgcctacc
aggaacaaagagctgctgttcgtccactctgccgagggctctgagttttggagcgccctg
ctggagaaggcctatgcaaaggtgaatggctgctatgaagctctgtctggtggcaccacc
accgaaggctttgaagatttcactggaggtatcgcagaggtccacgaactagcaaaagca
ggtccaaacctattcaaagtcatccagaaggctttgagctggggctcactgctgggctgc
tccatagatatcacaaactcagctgattcagaggccattactagtcagaaactggtgaaa
ggacacgcctactcggttacaggagcagatgaggtggagtacaggggcaacttaaccaaa
ctgatccggatcaggaacccctgggggcaagtggagtggaccggagcctggagtgatggg
tcatcagaatggcgtcagatcagtgacgccgatcgtgagagattgagctgcaaagcagaa
gatggagagttctggatggcgttctctgatttcctgcgtctttactcgcgggtggagatc
tgtaatctgacccctgatgctctgtcagacgaaagccttaataagtgggcactgtccaag
tttgatggcaactggaggaatggatcaactgctggaggctgcaggaattatccaaactca
ttctggatgaatcctcagtttttgatcaagctggaggagcaggacgatgacccaactgat
aatgaagtgggatgcagcttcgttgtgggtctgatccagaagaaccgccgcaaaatgaga
aaagtcggagaggacatgcacaccatcggcttcgccatctacgaggttcctgacgagatt
gccgggcagaggaacgtccacctggaccgcaacttcttcgtccgacatgcatcagcagcc
cgttctgagaccttcatcaacctgcgtgaggtttgctctcgtttctgtctgccccccggc
gagtatctcatcgtaccctccaccttcgagcctaacaaggatggagacttttgtgttcgc
gtcttctctgagaaacaggccgagttccaagagcttgatgaccctgtcgattgcaacgtt
cctgagattaatgtgaatgagggtgacatcgatagccggttcaagaatctgtttggacag
cttgctggggcagatgctgaaatctcagcatttgagctgcagaatatcctgaacaaagtg
atatctaaacgcaaagacattaaaacagatggatttagtttggacacttgccgcaacatg
gtgaacttactggataaagacggcagtggcaaactgggcatggttgaatttaagattctc
tggactaaaattgagatgtacctggacatcttctgtaaaaacgacaaggacaaatccggc
acaatgagctctatggagatgagggaagccatagggaaagcaggcttctctctgaacaac
cctctacaccagatcttggtcgcgcgctacagcgactccaatctcaccattgactttgac
aactttgtgggctgtattatgcgccttgaatgcatgttcaaaacatttaaaatgctggac
aagaacaaggctggcacagtagagctgaacttttctgagtggctgaattttgcaatgctt
tga
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