Labeo rohita (rohu): 127159478
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Entry
127159478 CDS
T09007
Name
(RefSeq) calpain-2 catalytic subunit-like
KO
K03853
calpain-2 [EC:
3.4.22.53
]
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04141
Protein processing in endoplasmic reticulum
lroh04210
Apoptosis
lroh04217
Necroptosis
lroh04218
Cellular senescence
lroh04510
Focal adhesion
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
127159478
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
127159478
04217 Necroptosis
127159478
04218 Cellular senescence
127159478
09144 Cellular community - eukaryotes
04510 Focal adhesion
127159478
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lroh01002
]
127159478
Enzymes [BR:
lroh01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.53 calpain-2
127159478
Peptidases and inhibitors [BR:
lroh01002
]
Cysteine peptidases
Family C2: calpain family
127159478
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_6
EF-hand_1
EF-hand_7
EF-hand_8
CAPN13-like_C_EFh
DUF5580_M
Motif
Other DBs
NCBI-GeneID:
127159478
NCBI-ProteinID:
XP_050958243
LinkDB
All DBs
Position
Unknown
AA seq
700 aa
AA seq
DB search
MSNIAKVLSRRQDRGEGLGTNEQAIPYNKQDYQSLKQECLAKRTLFCDPTFPAESDSLGY
NELGRYSFKTRGVQWKRPKELCSNPEFIVDGAKRTDICQGALGDCWLLAAIASLTLDNEV
LERVVPPGQSFTQEYAGIFHFQFWQYGEWVDVVIDDRLPTRDGKLLFVHSAEGSEFWSAL
LEKAYAKLNGSYEALAGGSTTEGFEDFTGGISENYELSKAPPYLFKLMQKALTLGSLLGC
SIDITSSYESEAVTSLKLVKGHAYSVTGAEEVHSYGCPVQLVRIRNPWGQVEWTGPWSDN
SNEWNSVQPEEKSKLDYSGEDGEFWMAYSDFIQQFSKLEICNLTPDTLSSEDVSRWNYSQ
FEGNWRVGSTAGGCRNNPATFCSNPQFVIKLDEEDDDPHDGEDGCTILVGLMQKDSRKDR
RFGRDLNTIGFAIYKVPDEFKGRNNIHLGPDVLLRQRSIAGSNTFINLREVGERFKLPPG
EYVIIPSTFEPHRKGSFILRVFTEKEAAASLMDAEISADVKKQHISESDVDPHFKHLFSQ
IAGNDSEVSVFELQKILDSVTSKRTGLKMDGFSTETCRHIISLLDRDGSGKLGLVEFHIL
WIKIQKYLEVFKKHDTDSSGTMSSHEMRNAVKEAGFQLNNEVLEVIISRYANQQYAIDFD
CFVGCLIRLEMLFKIFKTFDKKSTGKIELDILQWLCLALS
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atgtctaatattgctaaagttctttctaggaggcaggatagaggagaaggattgggaaca
aatgagcaggcgattccctacaataagcaggactaccagagcctgaagcaggagtgtctg
gccaaaagaaccctgttctgtgacccgaccttccctgctgaatccgactctctaggatac
aatgaactcgggcggtactcattcaagaccagaggagtgcaatggaagagacctaaggag
ctctgctcaaaccctgagttcattgtggacggtgccaagcggacagacatctgccaggga
gctttaggtgactgttggttgttggcggctattgcatctttgactctggataatgaggtt
ctggaacgtgtagttccacctggacagagttttacacaggaatatgccggcatctttcac
ttccagttctggcagtatggtgaatgggtggacgttgtaattgatgaccggctgcccacc
agagatgggaagctgctgtttgttcattcagccgagggctctgagttctggagtgccttg
ttggaaaaggcgtatgcaaagttaaatggctcatatgaagctctggcgggaggttcgacc
actgagggttttgaggatttcacaggaggcatctctgagaactacgaattgagcaaagct
cctccatacttgtttaagctcatgcagaaagcactaacgctgggatcattactgggctgc
tctattgatattaccagttcatatgagtcggaagcagtgacgagtctgaagctggtgaag
ggtcatgcctactctgtcacgggcgcagaggaggttcattcctatggctgtccagttcaa
cttgtgcgtatcaggaacccgtggggtcaggtagagtggacgggcccttggagtgacaat
tctaacgagtggaacagcgtccaaccggaggagaagtctaaactggattattcaggtgaa
gatggagagttctggatggcgtattcggacttcatacagcagttctcgaagttggagatc
tgtaatctgactccagacactctttcgagcgaagatgtgagccgatggaactacagccag
tttgaaggcaactggagggtgggatccaccgcagggggctgcaggaacaacccagctaca
ttctgctcaaaccctcagtttgtaatcaagctggatgaagaagatgatgatcctcatgat
ggagaggatggctgcacgatcctcgtgggtctgatgcagaaagacagtcgtaaagacagg
cggtttggacgagacctgaacaccattggcttcgctatctataaggttccagatgagttc
aagggtcgcaataacattcatctaggtcctgatgtattactgcgtcagcgatccattgct
gggagcaacaccttcatcaacctacgagaggtgggcgagcgcttcaaactgcctccgggt
gaatatgtcatcatcccctccactttcgagccccatcgcaagggaagcttcatactgcgt
gtgttcacagagaaagaggctgctgccagcctgatggatgccgaaatcagtgcagatgtg
aaaaagcaacacatatctgagagtgatgtggacccacatttcaaacaccttttcagtcag
attgctggaaatgactcagaggtgtctgtgtttgaactacagaagatcctggacagtgtt
acctcaaaacgaaccggtctgaagatggatggatttagtacagaaacttgtcgccacatt
atcagcctgctagatagagatggcagcggcaaactcggccttgtggagtttcacatactg
tggataaagatccagaaatatttggaggtttttaagaagcatgatacagacagctcaggc
actatgagttcgcatgagatgagaaatgctgtgaaagaagcagggttccagctgaacaat
gaggtacttgaggtgataatctcacgctacgccaatcagcagtacgccattgactttgat
tgcttcgttggctgcctgattcgcctggaaatgctcttcaaaatatttaaaacattcgat
aagaagagcaccgggaaaattgagctggatatcctgcagtggctctgcttggcacttagt
tga
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