Labeo rohita (rohu): 127159480
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Entry
127159480 CDS
T09007
Name
(RefSeq) calpain-2 catalytic subunit-like
KO
K03853
calpain-2 [EC:
3.4.22.53
]
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04141
Protein processing in endoplasmic reticulum
lroh04210
Apoptosis
lroh04217
Necroptosis
lroh04218
Cellular senescence
lroh04510
Focal adhesion
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
127159480
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
127159480
04217 Necroptosis
127159480
04218 Cellular senescence
127159480
09144 Cellular community - eukaryotes
04510 Focal adhesion
127159480
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lroh01002
]
127159480
Enzymes [BR:
lroh01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.53 calpain-2
127159480
Peptidases and inhibitors [BR:
lroh01002
]
Cysteine peptidases
Family C2: calpain family
127159480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_6
EF-hand_1
EF-hand_7
EF-hand_8
CAPN13-like_C_EFh
DUF5580_M
Motif
Other DBs
NCBI-GeneID:
127159480
NCBI-ProteinID:
XP_050958245
LinkDB
All DBs
Position
Unknown
AA seq
635 aa
AA seq
DB search
MVTDSSSGFPLQKPTMELCSNPQFIVDGAKRTDICQGALGDCWLMAAIASLTLDNELLER
VVPQGQSFTENYAGIFHFQFWQYGEWVDVVIDDQLPTKNGKLLFVHSAERFEFWSALLEK
AYAKVNGSYEALSGGWATEGFEDFTGGIAESYELSKAPPHLFKLMQKALTLRSLMGCSIS
SSSQETETKTSLKLVKGHVYSVTGAEEVHSYGRLVQLVRIRNPWGRVEWIGPWSDNSNEW
NSVQPEEKAKLFYSGEDGEFWMAYSDFIQQFSKLEICNLTPDALSSDTVSRWNYSQFEGD
WRVGSTAGGCRKNKDTFCSNPQFVIKLEEEDDDPHDGENGCTILVGLMQKDFRKDRRFGR
EPNSIGFAIYKVPDEFKGHNNIHLGPDVLLHQPTAKSNTFTKLREVGERFKLPPGEYVIV
PSTFEPHCNGSFILRVFTEKEAAASLMDLDISADVKKQYVSESDVDPHFKKLFNETAGND
SEVSVFELQKILDSVISKRTDVKTDGFSMETCRHIISLLDKDGSGKLGLVEFHILWIKIQ
KYLEVFKKHDTDKSGTMSSYEMRAAVKEAGFQLNNDVLQVITSRYANQQHAIDFDSFVDC
LIRLEVHFKMFDVFNKKNTGKIELDIRQWLCLALN
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atggtaaccgacagcagctcaggtttccccttacaaaaaccaaccatggagctctgctca
aaccctcagttcattgtggacggcgctaagcggacagacatctgccaaggagctttaggt
gactgttggttgatggcagctatcgcatctttgactctggataatgagcttctggagcgt
gtggttccacaaggacagagttttacagagaactatgccggcatttttcactttcagttc
tggcagtatggtgaatgggtggatgtggtcattgatgaccagctgcccaccaaaaatggg
aagctgctgtttgttcattcagctgagcgttttgagttctggagcgctctgttggaaaag
gcctatgcaaaggtaaacggctcatatgaagctctgtcgggaggctgggccactgagggt
tttgaagatttcactggaggcatcgctgagagctatgagctgagcaaagctcctccacat
ctgtttaagctcatgcagaaagcactgactctgagatcattgatggggtgttccatttct
tccagttcacaggagacagagacaaagacgagtctgaagctagtgaagggtcatgtttac
tccgtcacaggcgcagaagaggttcactcttacggccgtctggttcagctggtgcgtatc
aggaacccgtggggtcgggtggagtggataggcccttggagtgacaattctaacgagtgg
aacagcgtccaaccggaggagaaagctaaactgttttattcaggtgaagatggagagttc
tggatggcgtattcagacttcatacagcagttctcaaagttagagatctgtaatctgact
ccagacgccctttcaagtgacactgtgagccgctggaactacagccagtttgaaggagac
tggagagtgggatccaccgcagggggctgcaggaagaacaaagatacattctgctcaaac
cctcagtttgtgatcaagctggaggaagaagatgatgatcctcatgatggagagaacggc
tgcacgatccttgtgggtctgatgcagaaagattttcgtaaagacaggcggtttggacga
gagccgaactccattggcttcgctatctataaggttccagatgagtttaagggtcacaat
aacattcatcttggtcctgacgtactgttgcatcagcccactgcaaagagcaacaccttc
accaaacttcgagaggtgggtgagcgcttcaaactgcctccgggtgaatatgtcattgtc
ccctccactttcgagccgcactgcaatggaagcttcatactgcgtgtgttcacagagaaa
gaggctgctgccagtctgatggatttggacatcagtgcagatgtgaaaaagcaatacgta
tccgagagtgatgtggacccacatttcaaaaagcttttcaatgagactgctggaaatgac
tcagaggtgtctgtgtttgaactacagaagatcctggacagtgttatctcgaaacgaacc
gatgtgaagacagatggatttagtatggagacttgtcgccacattatcagtctgctagat
aaagatggcagcggcaaactcggccttgtggagtttcacatactgtggataaagatccag
aaatatttggaggtttttaagaagcatgatacagacaaatcaggcactatgagttcctat
gagatgagagctgccgtgaaagaagcagggttccagttgaacaatgacgtacttcaggtg
ataacctcacgctatgccaatcagcagcacgccattgactttgattccttcgttgactgc
ctgattcgcctggaagtgcacttcaaaatgtttgatgtgtttaataagaagaacactgga
aaaatcgagctggatatccggcagtggctctgcttggcccttaattaa
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