Labeo rohita (rohu): 127160000
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Entry
127160000 CDS
T09007
Symbol
itga1
Name
(RefSeq) integrin alpha-1
KO
K06480
integrin alpha 1
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04510
Focal adhesion
lroh04512
ECM-receptor interaction
lroh04810
Regulation of actin cytoskeleton
lroh04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
127160000 (itga1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
127160000 (itga1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
127160000 (itga1)
04810 Regulation of actin cytoskeleton
127160000 (itga1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lroh04147
]
127160000 (itga1)
04515 Cell adhesion molecules [BR:
lroh04515
]
127160000 (itga1)
04090 CD molecules [BR:
lroh04090
]
127160000 (itga1)
Exosome [BR:
lroh04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
127160000 (itga1)
Cell adhesion molecules [BR:
lroh04515
]
Integrins
Integrin alpha subunits
127160000 (itga1)
CD molecules [BR:
lroh04090
]
Proteins
127160000 (itga1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
Integrin_A_Ig_2
FG-GAP
Integrin_A_Ig_3
Integrin_A_Ig_1
VWA_2
FG-GAP_3
Clathrin
LYRIC
MFS_Mycoplasma
Motif
Other DBs
NCBI-GeneID:
127160000
NCBI-ProteinID:
XP_050958648
LinkDB
All DBs
Position
Unknown
AA seq
1188 aa
AA seq
DB search
MLSGVVHFSLAALLALLPWLSCFNVDEKNQMSFSGPVEDMFGYTVQQFKNSEGKWVLIGS
PLTGQPAKRTGDVYRCPVGQNKSTVCEKFLLPENTTIPNINEVKENMTMGTTLVVNPDGN
GFLACGPQYGYMCGKQQYVTGICSNVSSSFKVLNSIAPTVQECKQDMDIVIVLDGSNSIY
PWEPITTFLVKFLQNIEIGPARVGIVSYGDYVGHVFNLSQFSNKNDLLKEAAQIPQRTGH
KTMTALGIDTARKEAFTVERGARPGVKKVMVIVTDGESHDHFNLKNVIDECERDGIERFA
VAVLGDYNRQNKSTEEIKKFTDEIEFIASEHKSDHFFNVSDELALVTIVDALGSKIFALE
ATSENHTSSFEMEMSQSGFSAHTSKAGVMLGAVGAFDWSGTVVMQEGQEFVVPQKNTFHD
LSVQRYEGIAGYVGYDVQSAYTPNGVLYIAGAPRFNHSGRVTVYRFDGENVTITQTLKGE
QIGSYFGSVLQTHDIDRDNYTDILLVGAPMYMGPERDEQGQVYVYKLNEDGLFEHEMTLK
PVNQTCCTAHSQSNCKSVSKNEPCGARFGTAIAAVPDLNLDGFSDIVIGSPLENDHRGAV
YIYHGFQKSIKEKYVQRIAAGGDGESMKFFGQSIHGIMDLNDDGIIDVTIGGIGGAALFW
SRDVAELLAEMTFDPSKINLQQTCQVQGRTTVCVKTKVCFKYRIKSDKETSTETVIRYSL
TLDSLRAIARGRFNETDSRKLLRNESIVNELCREHTFYTSDKLDFRDPIMVTLEFGLADE
DSGPVLDGELPTSLNKTIALVDCGNEDKCVANLHLKAAANISSLLIKSNQEKFYVNIDIH
NSRDNAYNTKVTLSHTENINYVKVEPKDKDCETNHTRIVCAVGYPFLKSNKKESFRIQFE
PNPAHIRKDIVINVNATTDSEESNSALNDNFVSIVIPVKHEANLRFTAHTKDHHLIFKDK
ESIPSVFNHTSVIGDEVKISYTILRERDPDMPSPPLLLYIMFPYQTPVKNFLLYLTDVSL
TAGISCNASKLINPLGIKPEKPYTVNSKKETLSPFLLSCQEKENPCVSFSCSIPPGDFTQ
INTTFRVWRPTFIKGEFSNIHMTVNARLEIKESELFILNDNVRTREVKIQVTKDIRSGIP
LWIIILSILIGLLILALVIFALWKAGFFKRKSVEDMKEDMKEDMKDAN
NT seq
3567 nt
NT seq
+upstream
nt +downstream
nt
atgctttctggagtcgttcatttctcactagcagcgcttctggctctgctgccatggttg
tcatgtttcaatgtggatgagaagaaccagatgtcattcagtggaccagtggaggacatg
ttcggatacactgtccaacaatttaagaacagtgagggaaagtgggttctgattggttct
cctctgactggacagccggctaaacggactggagacgtctacaggtgccctgtgggacaa
aacaaaagcactgtatgtgaaaaattccttttgccagaaaacacaacaattccgaacata
aatgaagtgaaggaaaacatgactatggggacgacgctggtggttaacccagatggcaat
ggctttctggcctgtggtcctcaatacggctatatgtgtggaaagcagcaatatgtcact
gggatctgctcgaacgtcagctcctccttcaaagtcctcaactccatcgctcccactgta
caagagtgcaagcaggatatggacattgtcatagtgctggacggttccaatagcatctac
ccctgggaacccatcaccacattcctggtcaaatttctgcagaacattgaaatcggacca
gcccgggtgggcattgtgtcgtacggagactatgtcggccacgtcttcaacctcagccag
ttcagtaacaaaaacgaccttcttaaggaagctgctcagatacctcaaagaaccggccac
aaaaccatgacagctctcggcattgatacggcaaggaaagaggcctttacagtggaacga
ggagcaagaccaggggtcaaaaaagtcatggtgatcgtcacagatggcgagtcacatgac
cacttcaatttgaaaaacgtcattgatgagtgtgaacgagatgggattgagcgattcgct
gttgctgtccttggtgactataatcgacagaacaaaagcactgaagaaataaagaagttc
actgatgaaattgaattcattgctagcgagcacaaaagtgatcacttcttcaatgtgtcg
gatgaattagcattagtgaccatcgtggatgccttaggaagcaaaatctttgctttagaa
gccacatctgagaatcacacctcctcctttgagatggaaatgtctcagtcgggattcagc
gctcacacgtctaaagcaggtgtgatgctgggagccgtaggcgcttttgactggagtggg
actgtagtgatgcaagaagggcaagagtttgttgttccccaaaagaacaccttccacgac
ctgtcagtgcagagatacgaaggcatagcgggatatgtaggttatgacgtgcagtcggcg
tacacacccaatggggtgttgtacatagcaggtgcaccacggtttaaccacagcgggcgg
gtgacggtgtaccgctttgacggagaaaatgtcaccataacacaaacactgaaaggagag
cagatcggctcctatttcggcagcgttctccagacgcatgacatcgaccgtgacaattac
actgacatccttctggtaggagcccccatgtatatgggtccagagagggacgaacaaggt
caagtctacgtctacaaactcaatgaggatgggctgtttgagcatgagatgacgctgaag
ccggtgaatcagacctgttgtacggctcactcccagagcaactgtaagagcgtgagtaag
aacgagccctgcggcgcacgcttcggcactgccatcgctgccgttcctgacctcaacctg
gatggcttcagtgacatagtgatcggatcacctctggagaacgaccacaggggggcggtg
tatatttaccacggctttcaaaaatccataaaggagaagtatgtacagcgcattgctgct
ggaggtgacggagagagcatgaagttcttcggccagtcaattcacggcatcatggatctg
aacgacgacggcatcattgacgtcactatcggaggaataggaggcgccgcgcttttctgg
tctcgggatgtcgcagagcttcttgccgagatgacctttgaccctagcaagatcaatctg
cagcagacgtgtcaggttcaagggcggaccacagtatgtgtgaagaccaaagtgtgcttc
aaatatcgaatcaagtctgacaaagaaacaagcacagaaacggttatcaggtacagtttg
actctggactcactgagagcgattgctagaggacggtttaatgaaacggacagcaggaaa
ctgctgaggaacgagtcgatcgtcaacgagctttgcagagagcacaccttctacacgtcg
gataaactggatttcagagaccccattatggtcacgctggaattcggtttagcggatgaa
gactcgggtccagttctagacggggaattaccgacgtcactcaacaagactattgcatta
gtagactgcgggaatgaggacaagtgtgtcgctaatctacaccttaaagctgctgcaaac
atctcaagtcttctcataaaaagcaaccaggagaaattctatgtcaacatcgacatccac
aacagcagagacaatgcctacaatactaaggttacactgagccacacggaaaatatcaac
tatgtgaaagtggagcccaaagataaggactgtgagacgaatcataccagaatagtatgt
gcggttggatatcctttccttaaatctaataaaaaggaaagctttagaatccagtttgag
cctaatcccgctcatattcggaaggacattgtgatcaatgttaatgcaaccactgatagc
gaggagtcaaattcagcactgaatgacaactttgtgagcatcgtcatccctgtgaagcac
gaagccaacctgagatttacagcgcatacaaaggatcaccacctcatctttaaagataag
gagtcgatacccagtgtttttaaccacactagtgtaatcggcgacgaggtgaaaatcagc
tacacgatcctgagagagagagatcctgacatgccaagtcctccgctgctgctctatata
atgttcccgtatcaaacgcctgttaaaaactttctgctgtacttgacagatgtctccctc
acagcgggcatcagctgtaatgccagcaaactgattaaccctttaggcatcaagcctgaa
aagccttatacagtgaattctaaaaaagagaccttgagcccttttcttttgagttgccaa
gaaaaagaaaatccctgcgtgtcatttagctgctccatcccacctggagacttcacgcag
atcaacaccactttcagagtatggcgacccaccttcatcaaaggagaattttccaacatt
cacatgactgtcaacgccaggctggagatcaaggagtcggaactgtttatattaaacgat
aatgtcaggaccagagaggtaaagattcaagtcaccaaagacatacgaagtggaatccca
ctatggattattatccttagtattcttataggacttttaatactggcacttgtcatcttt
gctttatggaaggctggattcttcaagagaaagtcggttgaggacatgaaggaagatatg
aaggaagatatgaaggacgctaattga
DBGET
integrated database retrieval system
