Labeo rohita (rohu): 127160232
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Entry
127160232 CDS
T09007
Symbol
usp43b
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 43 isoform X1
KO
K11856
ubiquitin carboxyl-terminal hydrolase 43 [EC:
3.4.19.12
]
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lroh01002
]
127160232 (usp43b)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lroh04121
]
127160232 (usp43b)
Enzymes [BR:
lroh01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
127160232 (usp43b)
Peptidases and inhibitors [BR:
lroh01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
127160232 (usp43b)
Ubiquitin system [BR:
lroh04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
127160232 (usp43b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
127160232
NCBI-ProteinID:
XP_050958853
LinkDB
All DBs
Position
3:complement(30411623..30502987)
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AA seq
1175 aa
AA seq
DB search
MDKRDKKAKRDPGKSTKRTGKLFRRKSFKSVESLVSKILKSLGSLASGGETTERSDAEDD
DGGFGESAPCAGNSGQVKKEDSSQVRKSSSLPCRSSAKERLFSLYGDKTPGVLGLKNHGN
TCFMNAVVQCLSNTDLLAEYLCLERYKLDLCHRGMNGFIKNENGQHEKGEVTERLASLVR
ALWTFQYTPQLSAEFKMTVSKYGAQFRGNSQHDALEFLLWLLDRLHEDVNSSSTLPNGNN
KSKSSGKGQEGGDEKPVSDNLTSPQTQTGVHHSFVQEHFQAQYKSSLTCPHCLKQSNTFD
PFLCISLPIPLRQTRPVCVTLVFSSKGQRYLRVGLAVPLFGSLACLRRMVADEGKISPDQ
VILTEIYTTGFQRSFFDDDDLTSIAESDIIYAFQAPPLYIRGGSARISGFHHSLPSSPYT
SSGPEGHRLAASGALSSEFLNQADGMVKILLLVCNAAGAGQQAVRFGPPFLMREDRSVSW
DQLQQSILSKLYYLMINGSQAHNFRVLFKIRVVGGSAAYSYLNPQDGRPLYHPAVDRALK
LCGSGGPPHVKLIVEWEHRIKDCLFGNIQEEVVKDSESVRAQQQHHVQQHSCTLDECFEL
YTKEEQLAPDDAWKCPHCKQLQQGMVQMSLWTLPDILILHLKRFRQVGERRNKLSTLVHF
PLTGLDMGRHVVKRSSCARPPPGWKQQAHQRPEASRHTLNFLYDLYAVCNHHGGMHGGHY
TAYCRNSVDGVWYAYDDSSVEPVPEGEVCTRGAYILFYQRRDAIPSWSASCSLQGSSSPS
TSVHWLIRLNADNRISNSTSKLSISSSAPEPQTPPIPIVHKTKNEDNDAVEPPPFVRGVR
GHSMSMRYPSKSKTGPGKVLPLRWSFASKDRRKPSSVAPQTGNDELVEYLESGRRPRCTK
EPIVSIVASPSQVKAQLREDDSLSSPSCSSIVERSSYQGPDSPRLPEGQSRPASDLNGIK
SDSSSAKNSSKSKQEHERTQAIKLLQGSPTALPNGASNSASHSRDSTLKRLRNKPAVTSR
THPSQTQTATGESRGKDGAAISTAQLQDKDVVHGKTLSSKSLIKLSQSNGTLNGKGTEVR
KTGTAHKSTSKVVNSREIQDCSTTADIKRAHSSSNIQSRLDMTLKRTLSLQRNGPLVPAP
HKGPAVDKSSYATLQRIRYNSTSLGRQRPVPESCF
NT seq
3528 nt
NT seq
+upstream
nt +downstream
nt
atggataaacgcgacaagaaagcgaaaagggatccagggaagtctacgaaacgcacaggg
aagcttttccggaggaaatcgtttaaatctgtggaaagtttggtgagtaagatcctgaaa
agtttggggagcttggccagcggcggagaaacaaccgaacgctcggatgctgaggatgat
gacggtgggtttggagaaagcgcaccttgcgctggaaactcgggacaggtgaaaaaagag
gacagcagccaggtgaggaaaagttcctcgcttccctgccgttcctccgcgaaagagcga
ctgttctcgctgtacggggataaaacgccaggcgtgctgggtctgaagaaccacgggaac
acctgcttcatgaacgccgtcgtgcagtgcttgagcaacacggacctgctcgctgagtat
ctgtgtttggagcgatataaactggatttgtgtcacaggggaatgaacggatttataaag
aatgagaacgggcagcacgagaaaggagaggttacggaacggctcgcatctttggtccga
gcgctttggacttttcaatacactcctcagctctcggctgagttcaagatgaccgtatct
aaatatggtgcacagttccgggggaattcccagcatgacgctctcgaattcctgctctgg
cttctagaccgcctccatgaggacgtcaactcatcttcaactctccccaatgggaataac
aaaagcaaatcgagtggcaagggtcaagaaggaggtgatgaaaagcccgtctctgataac
ctgacctcaccacagacacagactggtgtacatcacagctttgtgcaagagcacttccag
gcacaatataagtcatctctgacatgcccacattgtcttaagcagagcaacacgtttgat
ccttttctgtgcatttccctccccatccctctaagacagacgagacccgtgtgtgtgact
ttggtgttcagcagtaaagggcagcggtatctgagagtggggctcgctgtgcctcttttc
ggctctttggcatgtctacgccggatggtggcagatgagggcaagatctctcctgatcag
gtaatattaacagagatctacacaacaggattccagcgctcgttctttgatgacgatgac
ttgaccagcatagcggagagtgacatcatctatgccttccaagctccgcccctttacatc
aggggtggatctgcacgaatctcagggttccaccacagtcttccgtcctctccgtacacc
tcgtctgggccagagggtcacagactggctgcgtccggagcgctgtcctcagagttcctg
aaccaggccgatgggatggtgaaaatcttgctgctagtgtgtaatgcagccggagcggga
cagcaggcagtgagattcggtcctccgtttttgatgagagaggacagatcagtgtcgtgg
gaccagctacagcagagcatcctcagtaaactctactacctaatgatcaatggatcacag
gcacataatttcagggtgttgttcaagattcgtgttgttgggggatctgcagcttacagc
tacttaaatccccaagacggacggccgctttatcaccctgcagtggacagagctctaaag
ctgtgcggctcaggcggaccgccgcatgtgaagctcattgtagagtgggagcacagaatc
aaagactgcctgtttggtaacatccaagaggaggtggtgaaggactcagaaagtgttcgt
gctcaacaacaacaccatgttcaacagcacagctgcaccctggatgagtgctttgagctc
tacaccaaagaagaacaactggcccctgacgatgcatggaagtgtcctcactgtaagcag
ctgcagcaaggcatggtgcagatgagcctgtggaccctcccagacatcctcatccttcac
ctcaagcgcttccgacaggtaggagagcgccgtaacaagctctccacgctggtccacttc
cccctcactggcttggatatgggccgccatgtggtgaagaggagcagctgtgcccgaccg
ccgcccggctggaagcaacaggcccatcagcggcccgaagccagccgacacacgctgaac
ttcctgtatgacctgtacgccgtgtgtaaccatcatggaggcatgcatggaggccattac
acagcatactgcaggaactcagtggacggtgtgtggtatgcctacgatgacagcagtgtg
gagccggtgcctgagggggaagtgtgcacgcgtggtgcttatatcctcttctatcagaga
cgagatgccatcccatcctggtctgctagctgctcgctacaaggttcctccagcccctct
acatcagtgcactggctcatccggctgaacgcagataaccgaatctcaaattcaaccagc
aagctgtctatttcatcttcagcacctgagccccaaacaccacccattcctatcgtccat
aaaactaaaaatgaagacaacgatgcagttgagccgccgccatttgtacgaggcgttcgg
ggccacagtatgagtatgcgctatccctccaaatccaagacgggcccagggaaagttctt
ccactgcgctggtcatttgcttccaaggaccgcagaaaaccctccagcgtcgctccacaa
accggaaacgacgagctggtggagtaccttgagtccggccggcgacctcgatgcaccaag
gagcccatagtaagtattgtggccagtccttcacaggtcaaagcccagcttcgcgaggac
gattctctaagttccccgagctgtagcagtattgtggagcgaagtagctatcaaggtcca
gattcgcccagactccccgaaggccagagcagaccagcgtctgacctcaacggcatcaaa
tccgacagctcatcagccaaaaacagttcaaaaagcaagcaggagcacgaaaggactcaa
gccattaagttgcttcaaggttctcctactgcgcttcccaatggtgctagcaacagtgca
tctcattccagagactccacgttaaaacgcctacgaaacaagccggctgtgactagcagg
actcatcccagccagacgcaaacagccacgggggaaagcagggggaaagacggggccgcc
atcagcactgcccaattgcaagataaggatgtggttcacgggaaaacgctttcaagcaag
agcttgatcaaactgtctcaatccaacgggactctaaatggaaaaggcactgaggtgagg
aaaactggcactgctcacaagagtaccagtaaagtggttaacagcagagaaatccaggat
tgttcgaccacagctgatataaaacgtgcccacagctcatccaatattcagagcaggcta
gatatgactttgaaaaggacgttgtctctccaaagaaatggtccattggtaccggccccc
cataaaggacctgcggttgataaatcctcctatgcaacactacagagaatcagatacaac
agcacttcactgggcaggcagagacctgtacctgagtcctgcttctga
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integrated database retrieval system
