Labeo rohita (rohu): 127160755
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Entry
127160755 CDS
T09007
Name
(RefSeq) NACHT, LRR and PYD domains-containing protein 12 isoform X1
KO
K22614
NLR family CARD domain-containing protein 3
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
lroh04054
]
127160755
Pattern recognition receptors [BR:
lroh04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
127160755
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
NLRC4_HD2
FIIND
FISNA
NOD2_WH
PRY
LRR_6
SPRY
CARD
LRR_4
LRR_8
Motif
Other DBs
NCBI-GeneID:
127160755
NCBI-ProteinID:
XP_050959363
LinkDB
All DBs
Position
Unknown
AA seq
1536 aa
AA seq
DB search
MSLLEKKEEENIVHQKQGSTSPEPSGVSVKSDQSMTNPLQFGDGTGTFNPRSKEDQTASC
SVSSYVSTKSETYVHHHRHLSEGAMTSDPVDGQTGDLQQDSYQPVDDDLHRVKDQHKNSM
KRKYDSLFEGINMRENQILLNRIYTQLYIIEGDTELVNEEHEVLQMEKTARTPHLHITPI
YCNDIFKPLSGHVKKDKIKVVLTKGIAGIGKTVSVHKFILDWAEGKANQDVDFMFVLPFR
ELNLIQDHQYSLHRLLLDFHPELQDMDSKIYEECNVVFIFDGLDESRITLFSESEKVSDV
TETSSVGVLISNLVKGDLLPSAHIWITSRPAAVSHKLSGYVERVTEIQGFNEPQKEEYFR
KRISDKEQASIIISHIKKAKSLHIMCHIPIFCWISAAVLQQLLKEDLSAEIPQTLTEIYI
HFLLTQINMKNQKYEEKDSGNLLQSNREVIVKLAELAFKQLIKGNIMFYEEDLRESGIDV
TDASVYSGICTEIFKEESVIHQRKVYSFIHLSFQEFLAAFYVFYSHLLKNMKPFQLFLDD
KYKGSLYELLTSTVDQTLVSKNGHLDLFLRFLLGISLESNQRLMKGLLTHTENSLETIRE
TMQYIKERIKGHTDFPADRSINLFLCLLEVNDQTLYQEIQQFVKSDKHSKVKLSSAHCSA
IAYMLQMSEEVLEEFEPMKYNALDEGRWRLMPAVMNCRKALLAGCGITDQHCESLSSALQ
SLNSPLIMLDLCNNDLQDSGVKLLSDGLKSAHCQLNILRLSGCRLTGQCCESLSSALQSS
NSHLRELDLSNNDLQDSGVRLLSDGLKSPNCQLEILRLAFCNLTGQCCESLSSALQSSNS
SLRELDLSNNDLQDLGVEMISAGLKSSHCQLNTLRLSGCMVTEKGCGYVFAALSSNPSHL
RELDLSYNHPGESVVKLLSNPNCTLDKLNVDHGGESRITAGVYKYACNLTLDPDTANNEF
ILSEENRKVTYVEKDQSYPDHLERFVVYQILCRESLTGRCYWEAEWSGVEAVLSVTYKGI
VRKERSSDCMFGRNKNSWSLLCSEGRFIARHNNNSTDISAPSCSSKRVGVYLDKSAGTLS
FYSISDTNTLTHLHTFNNTFTESLYAGFGVYYLNSSVSLCDINSLYKEPSVGNKTNTHIS
RFSNPKPSEPNLHPLLTCQSCINIVDSDQWVQIEPLIYTEEGMSKFGVSTVPGRYECIRT
RMRWVCDCEVTFQYHVVDGQFLNTQLKNLQYNRIGPVIDVTLISGKLEEVHLPHYVCLGN
SDPSLKDAVKVLSVKDEGIYVEPVQLTRFHAKIVQPSFSLKTLIISWIMQWDEHCDLLLY
MCSKDPLILHVYFFPLDKHLKEAVEKEEKSSHPISHPRPDKAFRMKTPHFLNVPGASVHP
KEGITLRRDTVPNFFKVKMHLENDLEMSLTRDEDHARDCNIVWTATIEKDELDQINPKKD
EQHLLLNSDKDKAAFFDNNFANLVQRVMNVKIVADQLLQQDIIHKEQYSQITHDNLTSAD
SMRKICDIMRKHSVTVKAKLITILQDEKLYDFRTSV
NT seq
4611 nt
NT seq
+upstream
nt +downstream
nt
atgagtctccttgaaaagaaagaggaggagaatattgttcatcagaaacaaggatcaaca
tcaccagagcccagtggtgtgtctgtaaagagtgaccaatccatgacaaacccccttcag
tttggtgatggaacagggacctttaaccctagatcaaaggaagatcagacagcttcatgt
tcagtatccagctatgtgtctacgaagagtgagacatatgtacatcatcaccgtcatctc
agtgaaggagcaatgacctctgatcctgtagatggtcagactggagacctgcagcaggat
tcttaccaaccagtagatgatgatctacacagagtcaaagatcaacacaaaaacagcatg
aagagaaagtatgacagtttatttgaaggaatcaacatgagagagaatcaaatcctcctg
aacaggatctacacacagctttacattatagagggagatactgaattggtgaatgaagaa
catgaggttttacagatggagaaaacagccagaacaccacacttgcacatcactccaatc
tactgcaatgacattttcaaaccattatcaggacatgtgaaaaaagacaaaataaaggta
gttcttactaaaggcatcgccggaattggaaaaactgtctctgtgcacaagttcatactg
gactgggcagagggaaaagccaatcaggatgtagatttcatgtttgtgcttccatttcga
gagctgaacttgattcaagatcatcagtacagtcttcatagacttctgcttgactttcac
cctgaacttcaagatatggactcaaagatttatgaggagtgtaatgttgtgtttatcttt
gatggtctggatgaaagcagaatcacactgttttcagagagtgagaaagtttcagatgtt
actgagacttcatcagtgggtgtgttgatttcaaacctcgtgaaaggagatctgcttccc
tctgctcacatctggatcacctccagacctgcagcagtcagtcacaaactctctggatac
gttgaacgtgtgacagagattcagggattcaatgagcctcagaaggaggaatatttcaga
aagagaatcagtgacaaggaacaagccagcataatcatatcacacattaaaaaagcaaag
agtctccacattatgtgtcacatacccatcttctgctggatttcagccgctgtgctacag
cagctcttgaaagaagatctgagtgcagaaatccctcaaactttgacagaaatttacatc
cattttctgcttactcagataaatatgaaaaatcagaagtatgaagagaaagattcaggt
aatctcctgcagtccaacagagaagtgattgttaaactcgctgaactggctttcaagcag
ctgattaagggcaatatcatgttctatgaggaggacctgagagagagtggcatagacgtc
actgacgcctcagtgtattctgggatttgcactgagatctttaaagaggaatctgtgatt
catcagaggaaagtctacagcttcattcatctgagctttcaggagtttctagctgctttc
tatgtgttttactcccatctattgaagaatatgaagccatttcagttgtttcttgatgat
aagtataagggctctctttatgaactactaacatcaacagttgatcagactcttgttagt
aagaatggacacctggatctttttctgcggtttctgctcggtatctcactggagtccaat
caaagactcatgaaaggtttactgacacacactgagaacagcttagaaaccatcagagaa
accatgcaatacattaaagagagaatcaagggacatactgatttcccagctgacagatct
atcaatttgttcctctgtctgctcgaagtgaatgatcaaactctgtaccaagagattcag
cagtttgtgaaatcagacaaacactcaaaagtgaaactgtcttctgctcactgctcagca
atagcctacatgcttcagatgtcagaggaggtgttggaagagtttgagcccatgaaatac
aacgcattagacgagggcagatggagattgatgccagctgtgatgaactgcagaaaagct
ctacttgctggatgtggtatcactgatcagcactgtgaaagtttgtcttcagctttacaa
tcattaaactcccctctgataatgttggacctctgtaataatgacctacaagattcagga
gtgaagttgctttctgatggactgaagagtgcacactgtcaactgaacatactgagattg
tcaggatgtagattgactggtcagtgctgtgaaagtttgtcttcagctctacaatcatca
aattcccatctgagagagctggacctgagtaacaatgacctgcaggattcaggagttagg
ctgctctcagatggactgaagagtccaaattgtcagctggagatactgagactggccttc
tgtaatctcactggtcagtgctgtgaaagtttgtcttcagctctacaatcatcgaactcc
tcattgagagagctggacctgagtaataatgacctacaggatttaggagtggagatgatc
tctgctggactaaagagttcacactgtcaactaaacacactaaggttgtctggctgtatg
gtgacagagaaaggctgtggttatgtgtttgcagctctgagttcaaacccctcacaccta
agagagctggatctgagttacaatcacccaggagaatcagtagtcaagctgctgagtaat
ccaaactgcacattggacaaacttaatgtggatcatggaggagagtccaggattacagca
ggagtatataaatatgcctgcaatctcacactggatccagatacagcaaataatgaattc
attctgtctgaggagaacagaaaggttacatatgtggaaaaagatcagtcatatcctgat
catcttgagagatttgttgtttatcagattctctgtagagagagtctgactggacgctgt
tactgggaggctgaatggagtggagttgaggctgttttatcagtgacatataaaggaatc
gtcaggaaagaacggagtagtgactgtatgtttggacgcaacaaaaactcctggagcctt
ttgtgcagtgaaggccgtttcattgcccgtcacaataataattcaactgacatatctgct
ccctcatgctcctctaaaagagtaggagtgtatttggacaagtcagccggcactctgtcc
ttctacagcatctctgacacaaacacactcacacacttgcacacatttaacaacacattc
acagagtccctctatgctggatttggggtttattatttaaactcctcagtgtctctgtgt
gacataaacagcctctataaagagccttctgttggaaacaagacaaatacacacataagc
aggttctccaaccccaaaccttctgagcccaatcttcacccactgcttacctgtcagtct
tgcatcaatatagttgattctgatcaatgggttcagattgagccattaatctatacagag
gaaggcatgtcaaagttcggggtcagcactgtaccaggccgctatgagtgtatcaggacc
agaatgcgatgggtctgtgactgtgaggtcacctttcagtatcatgtcgtagacggtcag
ttcctcaacacacagctgaagaatcttcagtataaccgaatcggtccagtgattgatgtg
acactgatctcaggcaaactggaagaagttcatctgccccattatgtctgtttaggaaat
tctgacccctctctcaaagatgctgtgaaagtcctcagcgtaaaagatgagggaatatat
gtagagcctgtgcagttgacccgatttcatgctaaaattgtccaaccatcattctctctt
aaaacgttaattataagttggataatgcaatgggatgaacactgtgatcttcttctgtac
atgtgttctaaagatcctctcattttacatgtctacttttttccacttgataaacatttg
aaagaagctgtggaaaaagaagaaaaatcaagccatccaatcagccatcccagacctgac
aaggcatttcggatgaagactccacactttcttaatgttcctggtgcctctgtccatccc
aaagaagggatcacactcagaagagatactgtcccaaatttcttcaaggtcaagatgcat
ctggagaatgatcttgaaatgagccttacaagagatgaggatcatgctcgggactgcaac
attgtctggactgcaacaattgagaaagatgaacttgatcagataaatccaaagaaagat
gagcagcatctgcttctgaatagtgataaggataaagcagcattttttgataacaatttt
gcaaatcttgttcagagggttatgaatgttaagattgttgcagatcaactgcttcagcag
gacataattcacaaggaacaatattcacaaatcacacatgacaatttaaccagtgcggac
agcatgagaaagatctgtgacattatgcgtaagcacagcgtcactgtgaaagctaaatta
atcacaattcttcaagatgagaagctttatgacttcagaacatctgtctga
DBGET
integrated database retrieval system
