Labeo rohita (rohu): 127161218
Help
Entry
127161218 CDS
T09007
Name
(RefSeq) NLR family CARD domain-containing protein 3-like isoform X1
KO
K22614
NLR family CARD domain-containing protein 3
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
lroh04054
]
127161218
Pattern recognition receptors [BR:
lroh04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
127161218
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
FISNA
NLRC4_HD2
PRY
NOD2_WH
SPRY
LRR_6
LRR_4
SIR2_2
Motif
Other DBs
NCBI-GeneID:
127161218
NCBI-ProteinID:
XP_050959816
LinkDB
All DBs
Position
Unknown
AA seq
981 aa
AA seq
DB search
MSLDNKKEDDGAASKMSSTSALSSCGSMKSDQSREYPLNLNEGTSTSDPKITRRKRQRVE
YPEPSSVSAKKRKLSMDEPPEPLEEIQRVKDQHKTSMKIKCERLFEGNKHQMNETLLNRI
YTQLYIIEGESEGVNEEHEVLQMEKTARTKHSQDTPIYCNDIFKSSPEPGCEEKDQIKTV
LTKGIAGIGKTVSVQKFILDWAEGKDNQDVDFMFVLPFRELNLIRDHQYSLHRLLLDFHP
ELQDLDSKIYEECKVVFIFDGLDESRITLMFSDDQKVCDVTETSSVGVLMSNLMKGELLP
SALIWITSRPAAANQIPSKYINRLTEIQGFNETQKEEYFRKRISDQHQASRIISHIRRAR
SLHIMCHIPVFCWISSTVLQKLLKEHLSAEIPQTLTEMYIHFLLIQMNMRNQKYEERDPE
KLLQSNREVIVKLAEVAFKQLMKGNVMFYEEDLIESSIDVNDASVYSGICTEIIREESVI
HQRKVYSFIHLSVQEFLAAFYAFHYHVNETMEGLKNLASVQYLLKGVVDESLQSRDGHLD
LFLRFLLGVSLESNQRLLQDLLTHTENSSESIRRTTQYIKEKIKDGHELSTERSINLFLC
LLEVKDQTLSREIQEFVKSDKHSEKKLSPAHCSTIAYMLQMSEEVLDELDLKKYNTSDEG
RRRLIPAVINCRKALFAGCSLIDQDCKIVASSLQSSNSVLRELDLSNNDLQDSGVELLCD
GLKSPKCQLQILRLSGCMVTEEGCGYLSSALSSNPSHLRELDLSYNHPGQSGVQLLKHKL
EDPNYKLQILNLDHEGHFRITPGLRKYACDLTLDPNTAHTQLILSAGNKRAKCDKDNQPY
PYHPDRFEYCEQVLCQESLTGCCYWEVEWSGWGHVAVAYKGISRKGGSDCRFGLNDKSWN
IYCYDTIYSVWHNNKSTNIPQPSPSNRVGVYLDWSAGSLSFYSVSDTHTLTHLHTFNTTF
TEPLYAGFLVYRDSSVFLCPM
NT seq
2946 nt
NT seq
+upstream
nt +downstream
nt
atgagtcttgataacaagaaagaagatgatggcgctgcctctaaaatgagttctacatct
gctctatccagctgtgggtctatgaaaagtgatcaatccagggaatatcctctcaactta
aatgaaggaacatcgacttctgaccccaaaatcactaggaggaagagacagagagtagag
tacccagaacccagttctgtgtctgcgaagaagagaaaactctccatggatgaaccccct
gaacctctggaggagatacagagagtcaaagaccaacacaaaaccagtatgaagatcaag
tgtgagagattatttgagggaaacaaacaccaaatgaatgaaaccctcctgaacaggatc
tacacacagctctacatcatagagggagagagtgaaggagtgaatgaagaacatgaggtt
ttacagatggagaaaacagccagaacaaaacactcacaagacactccaatctactgcaat
gacatctttaaatcctcacctgaaccaggatgtgaggagaaagaccaaatcaagactgtt
cttactaaaggcatcgctggaatcggaaaaaccgtctctgtgcagaagttcattctggac
tgggccgagggaaaagacaatcaggatgtagatttcatgtttgtgcttccatttcgagag
ctgaacttgatccgagatcatcagtacagtcttcacagacttctgctggactttcatcct
gaacttcaagatctggactcaaagatttatgaggagtgtaaagttgtgttcatctttgat
ggtctggatgaaagcagaatcacactgatgttttcagatgatcagaaagtttgtgatgtg
actgagacttcatcagtgggtgtgttgatgtcaaacctcatgaaaggagagctgcttccc
tctgctctcatctggatcacctccagaccagcagcagccaatcagatcccctccaaatac
atcaaccgtctgacagaaattcagggattcaatgagactcagaaggaggaatatttcagg
aagagaatcagtgaccagcatcaagccagcagaatcatctcacacatcagaagagcaaga
agcctccacatcatgtgccacatccccgtcttctgctggatctcatccactgtgcttcag
aagctcctgaaagaacatctgagtgcagaaatccctcaaactctgactgaaatgtacatc
cacttcctgctgattcagatgaacatgaggaatcagaagtatgaagagagagatccagag
aaactcctgcagtccaacagagaagtgattgtgaaacttgctgaagtggctttcaaacag
ctgatgaagggcaatgtgatgttctatgaggaggacctgattgagagcagcatagatgtc
aatgacgcctcagtgtattctgggatttgcactgagatcattagggaggaatctgtgatt
catcagaggaaagtctacagcttcattcatctgagtgttcaggagtttctcgctgctttc
tatgcatttcactaccatgtgaatgaaactatggagggacttaagaatttggcttcagta
caatatttgcttaaaggtgtagtagatgaatccttacagagtagagatggacatctggat
ctgttcctgcggttcctgctgggcgtctcactggagtccaatcagagactcttacaggat
ctactgacacacacagagaacagctcagagagcatcaggagaaccacacagtacattaaa
gagaagatcaaagatggacatgaactctccactgaaagatccatcaatctgttcctctgt
ctgctggaagtgaaagatcagactctgtccagagagattcaggagtttgtgaaatcagac
aaacactcagagaagaaactctctcctgctcactgctcaacaatcgcctacatgcttcag
atgtcagaggaggtgctggatgagctggacctcaagaaatacaacacatcagatgagggg
agaagaagactgataccagctgtgatcaactgcagaaaagctctttttgctggctgtagt
cttattgatcaggactgtaaaattgtggcatcatctcttcaatcctcaaactctgttttg
agagagctggatctgagtaacaatgacctacaggactcaggagtggagctgctctgtgat
ggactgaagagtccaaaatgtcagctgcagatattaaggttgtctggctgtatggtgaca
gaggaaggctgtggttatttgtcttcagctctgagttcaaacccctcacacctgagagag
ctggatctgagctacaatcacccaggacaatcaggagtccagctgctcaaacacaaactg
gaggatccaaactataaactgcagatactcaatttggaccatgaaggacatttcaggatc
acaccaggactgcgaaaatatgcttgtgatctcacactggatccaaacacagcacacact
caactcatcctgtctgcagggaacaaacgagcaaagtgtgataaagataatcagccgtat
ccttatcatccagacagatttgagtactgcgagcaggttctttgtcaggagagtctgact
ggatgctgttactgggaggttgagtggagtggatggggtcatgtagcagtggcatataaa
ggaatcagcaggaaaggtgggagtgactgtcggtttggactcaatgacaagtcctggaat
atttactgttatgatacaatttactctgtttggcacaataataagagcacaaatattcct
caaccttcaccatctaacagagtaggagtgtatctggactggtcagctggctctctgtcc
ttttacagtgtctctgacacacacacactcacacacttacacacattcaacaccacattc
actgaacccctctatgctggatttctagtgtatcgtgattcttcagtgtttctctgtccg
atgtaa
DBGET
integrated database retrieval system
