Labeo rohita (rohu): 127162021
Help
Entry
127162021 CDS
T09007
Name
(RefSeq) laminin subunit alpha-4-like
KO
K06241
laminin, alpha 4
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04510
Focal adhesion
lroh04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
127162021
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
127162021
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
Laminin_II
Laminin_I
Laminin_G_3
Anticodon_2
Motif
Other DBs
NCBI-GeneID:
127162021
NCBI-ProteinID:
XP_050960754
LinkDB
All DBs
Position
Unknown
AA seq
1561 aa
AA seq
DB search
MHTGECLPEASKISECNIDCDACIWSLIGDIRQSNKTLDQVRNSVLNISTGAAANDRLKY
YNYTAHRLQDQFLGWRNKHAVMRGDTRHLEKVTQQLLTDMELVAEEEEAVQLLGERVDQD
TLESSVLAKTLTANLSSLNDLIEDMIRDWELYGVHQELDPQVKLQKIAEAERILGWIRNL
DLSPKEPLATDESSEAHELLRRVRHFEKTLMTTQGRLSPMREVLGRFTSRLSQAQDLLNK
AEDTLQQTLNKYKTNQLKLQRREAQQQRLKDVYNSVNQTIATAEETVSEANQTVLEVEDI
IMDVRQQHAEIDGARVLLERKTEKLSQSDRDLVLRAEDHADDLRRHAEELQYNLKGSDAN
GHVQKALNALNVYDNIVKNIDDANITSLTTLNISGSTQDATDEINSQLNLTRSQSDDVLT
EASSLHFKQRDVESTVIDNKKYIEETNEMMESSSKKIANIISDIKAIHKDRTPKRLQFTQ
EVAEGTLNRSAEVLKMVTPILKTVEEWDSNMKNEAYSAAAFDRTVLSAGEAVEDLSEIVP
ELLSKLRVVEEKKPVNNVSTNILKIRELIAQARSVAKKVQVSMKFNGQSAVEVHPHSNLD
ELKTVTSISFYIRVDPDKDPIEDRFLLYLGDKQGRKDYMGLAIKNDNLVYMYNLGGEDVE
IPLSSKPVSSWPPVFNLVKVERLGRHGKVFLTVPSQDTTAEQKFIQKGEADGTDSLFDLD
PKDNVFIVGGVPPDVKLPPALSLAPFVGCIELETLNSDVISLYNFKELHKMDVVESMPCP
RHKLAFSQSRVTSYLFDGSGYALVNNIERRGKIGIVTRFDIEVRTVANNGILFLMVNEAN
FFVLELKNGFLRLMYDFGFANGPVIMESNLAKLQINDARYHEVSVIYHHSKKIILLVDRS
HVKSMENEKKPLPFSDIYIGGAPSSILLSRPELSSLVGLKGCVKGFQFQKKDFNLLEEQG
TIGISSGCPEESFMSRKVYFTGDGYLGSTAKISPFQSFEGGLNFRTLQANGLLFYHRDGL
DEFSLSLENGAVVLQSKGTRVRSQKKNYNDGRSHFLVASVTNQKYELIIDDKDKQEKKKP
SSTPQSDNVPKSFYYGGSPTSSIQNFTGCISYAYISRQDRDIEPEDFQRYSENVQVSLQD
CPLERPPAALNNKESRESSRRSPGHSRKVGRDESSLTHGSKNNPLDVPETEAASCYLSAR
PRVTRHAHHYGGFAHSRHEYTCIASVIRDESHFSLSLKTRSAFGLIFYLADESEENFMAL
FLTHGRLVFTFGSDQNQVRIRSKERYNDGHWHDIIFIRGGNIGRLIIDGLTVLEDRAPAG
NISLLVQDPLYIGGVLPDQAMKNIQKSSVSGFSGCVRSLQLNGRWLTSASHSFGVTPCYE
GPSEPGTYFTEEGGYVLLDDSFNFGSRFKMVMEVRPRVVSAVLLHAFTREKEYLTLYIYQ
NKVAVVVNNGIRELSTYVSPKQEICDGNWHKITVIRDGNVVQLDVDSEVNHVVGSVHETA
QNSSSPVFIGGAPDSMLPHSLLSRRGYTGCMRNLSVNDSPVSFSKAALVSGAVGVGACPA
A
NT seq
4686 nt
NT seq
+upstream
nt +downstream
nt
atgcacacaggagagtgtctaccagaggcctccaaaatcagcgagtgtaatatcgactgt
gatgcgtgtatctggagtctgatcggagatattcgtcagtccaacaaaactctggaccaa
gtgaggaacagcgtgctgaacatttctacaggagctgctgccaacgacagactaaagtac
tacaactacactgcacacagactacaggatcagtttttaggctggagaaataaacatgca
gtgatgagaggagatacaaggcacctggagaaagtaacgcaacaactgcttactgatatg
gaactggtcgcagaagaggaggaagcagtgcagttattgggagaacgggtggatcaagac
acacttgagagctctgtgttagcaaagacacttactgctaacctctcatcactcaatgat
ctcattgaagatatgatcagggactgggaattatatggtgtccatcaggagttagatcct
caggtaaagctgcagaaaatagcagaagctgaacggatcttgggctggataagaaatctg
gacctctctcccaaagagccgcttgcaactgatgagtcctccgaggcccatgaattgctc
cgacgtgtgcgccactttgagaaaactctgatgactacgcaggggcgtctatcacctatg
cgggaagtactgggtcgattcacttctagactatctcaagctcaggatctcctcaacaaa
gctgaagacacattgcaacagacactcaacaaatacaagaccaaccagctcaaactacag
aggagagaggcacaacagcagcgtctgaaagatgtctataacagtgtcaatcaaactata
gctactgctgaggaaaccgtctctgaggcaaaccagactgtccttgaggtggaagatatt
atcatggacgtgagacaacagcatgcagaaatcgatggggctcgtgtcttgctggagaga
aagacagagaagttgtctcagtcagacagagatctagttctgagagctgaggatcatgct
gatgatctccggagacatgccgaagaacttcagtataatctgaaaggaagtgatgcaaat
ggacatgtacagaaagccctgaatgcattgaatgtttatgacaatattgtcaaaaacata
gatgacgctaacatcacctctctgaccactctcaacatctctggcagtactcaagacgct
actgatgaaataaacagtcaactgaacctcacacgctctcagagtgatgatgtgctcaca
gaggcctcatccttgcacttcaagcagagagatgttgaatccacagtcatcgacaataag
aaatacattgaagagaccaatgaaatgatggaaagctcctctaaaaaaatagctaatatc
atcagtgacatcaaagcaatccataaagatcgaactccgaaacgtctgcagttcactcag
gaagtggctgagggcactctaaaccgctctgctgaagtgttgaagatggtgacacccatc
ttaaagacagtagaggagtgggatagcaacatgaaaaatgaggcatactctgctgcagca
tttgaccgtactgttctgtctgccggcgaggcggttgaagacttgtcagagatcgtgcca
gaactactcagtaagctgcgtgtggttgaagagaaaaaacctgtgaataatgtctccaca
aacatcctgaaaatcagagaactcatcgctcaggcccggagcgtcgcaaagaaggtgcaa
gtgtctatgaaatttaatggccagtctgctgtagaggttcatccacactccaacctagac
gagctaaagacagtcacgtcaatcagtttctacatcagagtggacccagacaaagacccc
atagaagatcgcttcctactctacttgggagataagcaaggacgtaaggactacatgggg
ctggccataaagaatgataatctggtgtatatgtacaatctgggaggagaggatgtagag
attcctctcagttcaaagccagtcagctcctggcctcctgtcttcaatcttgttaaagtg
gagaggttgggtcgtcatggtaaagtgttcctaacggttccaagtcaagacaccacagca
gagcagaagtttatccagaaaggagaggcagatgggacagactccttgtttgaccttgat
cctaaagacaatgtttttattgtgggaggagtgcctcctgatgtgaagcttcctccagct
ttgagcttggctccttttgttggttgcattgaattagagactttgaatagtgatgtcatc
agtttgtacaactttaaggaacttcacaaaatggatgttgtggaatctatgccttgtccc
aggcataagttggcattctctcaaagtcgtgtgacaagttatttgtttgatggaagtggc
tatgctttagttaacaacattgaaagaagaggcaaaattggcattgtcactcgctttgat
atcgaagttcgaactgttgctaacaatggcattctattcctcatggttaatgaggcaaat
tttttcgtgctggagctgaaaaatgggtttctccgtctgatgtacgactttggttttgct
aatggtcctgtcatcatggaaagtaacttagccaaactccagattaatgatgcacgatat
catgaggtgtctgtaatttatcatcactctaagaagatcattttgctagtggacagaagt
catgttaagtcgatggaaaatgaaaagaaacctttaccgttctctgatatctacattgga
ggagctccttctagcattctgctttctaggccagagctgtcatccctggtgggactgaag
ggttgtgtaaagggcttccagttccagaaaaaggacttcaatctcctggaggagcaagga
accattggcatcagcagtggctgtcctgaggaatcatttatgtcccgtaaggtatatttc
acaggtgatggctatctgggctccacagctaaaatctcaccattccagtcttttgaggga
ggactaaacttcagaacactacaggccaatggactcctgttctaccacagagatgggttg
gatgagttttcgctctcattggagaatggtgctgtggtgctccagtccaaaggaacaaga
gtcagatcacaaaagaagaattataatgatggacgatctcatttcttagttgcctcagtc
accaatcagaagtatgagcttatcattgatgacaaagacaagcaggagaagaagaagccg
tcttccacacctcagtcagataatgttccaaagagtttctactatggaggttctcctacg
agttccatacagaatttcaccggatgcatcagttatgcatacattagcaggcaggataga
gatatagagccagaagacttccaacgttacagtgagaacgtgcaggtgtcgctgcaggac
tgcccactagagagaccccctgctgctctgaataataaagagagcagagaatcatctaga
agaagtccaggacattcccgcaaggtgggcagggatgagtctagcctgacacatggctcg
aagaacaatcctttggatgttccagagacggaagctgcttcctgttacctgtccgctcgc
ccacgagtgacccgccacgcccaccactatggcggttttgcccacagccgacatgagtac
acatgcatcgccagtgttatcagagatgaatctcacttttctctgtctctgaaaactcga
tcagcattcggtctcatcttctatctggctgatgagtctgaggaaaacttcatggctctg
ttcctcactcatggaaggctggtattcacattcggttcagaccagaaccaagtcagaatt
cgatcgaaggagaggtacaatgatggacattggcatgatattatctttatcagaggtgga
aatattggcagactgatcattgacggtcttacagtattagaggacagagctccagccgga
aacatctcactgcttgtccaagatcctctctatataggcggggtgctgcctgatcaggcc
atgaaaaacattcagaagtcatctgtgtctggcttctctggctgtgtgcgaagtctccag
ctgaatggccgctggctcacctctgcctcccacagttttggggttacaccctgttatgag
ggcccctctgaaccaggaacatacttcactgaggagggaggatatgtgctgctggatgac
tcctttaattttggctcgagatttaagatggtgatggaggtgcgccctcgtgtggtgtca
gcagtgctactgcatgccttcactagagagaaagaatatcttaccctgtacatctatcaa
aacaaggtggctgttgtggtgaataatggtatccgtgagttatccacctacgtgtctcct
aaacaggaaatctgtgatggaaactggcacaagatcacagtgatcagagatggtaatgtg
gtgcagctggatgtggattcagaggtgaatcatgttgtggggtctgttcatgaaacagca
cagaacagcagctctccggtgtttattggaggagccccagactccatgctgcctcacagt
ctcctcagcaggaggggctacacgggttgcatgaggaacctgtctgtgaacgattctcct
gtcagcttcagtaaagcggctttggtcagcggtgcagttggtgtgggcgcctgtcctgct
gcttga
DBGET
integrated database retrieval system