Labeo rohita (rohu): 127162104
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Entry
127162104 CDS
T09007
Symbol
rad23b
Name
(RefSeq) UV excision repair protein RAD23 homolog B
KO
K10839
UV excision repair protein RAD23
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh03420
Nucleotide excision repair
lroh04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
127162104 (rad23b)
09124 Replication and repair
03420 Nucleotide excision repair
127162104 (rad23b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
lroh03051
]
127162104 (rad23b)
03400 DNA repair and recombination proteins [BR:
lroh03400
]
127162104 (rad23b)
Proteasome [BR:
lroh03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
127162104 (rad23b)
DNA repair and recombination proteins [BR:
lroh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
127162104 (rad23b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XPC-binding
UBA
ubiquitin
UBA_7
Rad60-SLD
Crinkler
Rad60-SLD_2
UBA_3
Dsc3_N
Ubiquitin_5
CUE
Motif
Other DBs
NCBI-GeneID:
127162104
NCBI-ProteinID:
XP_050960848
LinkDB
All DBs
Position
Unknown
AA seq
378 aa
AA seq
DB search
MQITLKTLQQQTFKIDIDAEETVKALKEKIENEKGKDNFPVAGQKLIYAGKILSDDTALK
EYKIDEKNFVVVMVAKPKAAPASAATATSAASSSTTATPTPSAAPAAETPSESAAKEDKP
AEEKPAGGTAPSSTPTSSSPNANIFEEATSALVTGQSYENMVTEIMLMGYERDKVVAALR
ASFNNPDRAVEYLLTGIPAESEGSVGGADPVAPGGGAPAASTGLSSPSSTAPSQPSTGSG
ANPLEFLRNQPQFLQMRQIIQQNPSLLPALLQQIGRENPQLLQQISSHQEQFIQMLNEPV
QEAGQGGGGGGGGGGGGVAEAGGGHMNYIQVTPQEKEAIERLKALGFPEGLVIQAYFACE
KNENLAANFLLQQNFDDD
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgcagatcacgctgaaaaccctccagcagcagacgtttaaaatcgacatcgacgcggag
gagacggtaaaagccttaaaggaaaaaatagagaatgaaaagggaaaagataactttcca
gtggcgggacagaagttgatatatgcagggaaaatcctgagcgatgacacagctctcaag
gagtacaagatagatgagaagaactttgtggtggttatggtagcaaagcctaaagcggct
cctgcatccgctgccacggcaaccagcgccgcctcctccagcactacagcgaccccgacc
ccatctgccgccccggccgccgaaaccccgtctgagagcgcggccaaagaggacaaaccc
gccgaggagaaacccgccggcggcactgcgccctcctctacacccaccagttcttcgcca
aatgcaaacatatttgaagaggcaacgtctgcgctggtgacgggtcagtcctacgagaac
atggtgacggagatcatgctgatgggatacgagagagacaaagtggtggcggcgctgaga
gccagcttcaacaatcccgaccgtgccgtcgagtacctgctcacgggtattcctgcggag
agcgagggcagtgtaggaggtgctgacccagtggctcctgggggaggcgctcctgctgcg
tccacaggcctttcttcaccgtccagcaccgccccatcacagcccagtacaggatcgggg
gcaaatcctctggagttcctgaggaaccagccgcagttcctgcagatgagacagatcatc
cagcagaacccgtctctcctaccagctctgctacagcagatcggcagagagaacccgcag
ctcctgcagcaaatcagcagccatcaggagcagtttatccagatgcttaatgagccggtg
caggaggcggggcaaggtggcggcggcggcggcgggggcgggggcgggggcgtggccgag
gcaggaggcgggcacatgaactacatccaggtcacaccccaggagaaagaagctattgag
aggctaaaagcccttggattcccagaaggactcgttatacaggcctactttgcttgtgag
aagaatgaaaatttggctgcaaacttccttttacaacagaactttgatgatgattag
DBGET
integrated database retrieval system
