Labeo rohita (rohu): 127162220
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Entry
127162220 CDS
T09007
Symbol
samhd1
Name
(RefSeq) deoxynucleoside triphosphate triphosphohydrolase SAMHD1
KO
K22544
deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh03250
Viral life cycle - HIV-1
lroh04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
127162220 (samhd1)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
127162220 (samhd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lroh03400
]
127162220 (samhd1)
DNA repair and recombination proteins [BR:
lroh03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
127162220 (samhd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_2
HD
SAM_1
PDEase_I
HD_assoc_2
Motif
Other DBs
NCBI-GeneID:
127162220
NCBI-ProteinID:
XP_050960955
LinkDB
All DBs
Position
Unknown
AA seq
623 aa
AA seq
DB search
MMERGTKRPRRDEDCENHVSDFRRWDVEETVVYLRRAGFGKWEQKFREHGMTGPGLLYLT
EAHLEKMGVSPLGSRLEILHCLQKLWQISNEPMKVFNDPIHGHIELHPLLVQFIDTPQFQ
RLRHIKQLGATYLVFPGASHNRFEHSVGVGYLAGCLVRALSERQPELLITKQDVLCVQIA
GLCHDLGHGPFSHMFDGMFIPKVRPGEKWKHEVASVQMFDHLVKVNGLEEVMVHHGLTLP
DDLIFIKEQIAGPLDNSVLDSSWPYKGRPLEKSFLYEIVANKRNGIDVDKWDYFARDCYH
LGIQNNFDYQRFLKFARVCEVRGKKHICTRDKEVGNLYDMFHTRNCLHRRAYQHKVANII
ETMIAEAFVKADPHIRIQGSSGKIFTISSAIEDMEAYTKLTDHIFEQILYSSEPELSEAR
AILNNIVCRRLYKCVGQTTPETHVDASQEKLLDWAKEVARSKPSGTDANLIAEDFVVSVI
YMDYGMKEKNPINNVHFYCKKDPTKAIKIRKKQVSKLLPERFAEQLIRVYCKKTDDKSLE
AAKKYFVQWCMDRNFTKPQDGDVIAPELTPLKRDWHTLERDDEDSEPDDNGEGARPGTRD
ETPRKAGRQVKVNLFQAQGGSRL
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgatggagagaggaacgaaacgcccaagacgagacgaagactgtgagaatcacgtctct
gacttcaggcgctgggacgtcgaggaaaccgttgtctatctgcgtagagccgggtttgga
aaatgggagcagaaattcagagagcatggcatgaccgggccagggctactgtacctcacc
gaagcgcatttggagaagatgggtgtgtctcctctgggatcacgtctggaaatcctccac
tgccttcagaaactctggcagatctcgaacgagcccatgaaggtgttcaacgaccccatc
cacggccacatcgagctgcaccctctgctggtgcagttcattgacacgcctcagtttcag
aggcttcgccacatcaagcagctgggagcgacttacctggtcttccccggggcttcgcac
aaccgcttcgagcactctgtcggggtgggatatctggccggatgtctagtgcgggctctc
agtgaaagacagccagagctcctcataacaaaacaagatgtcctgtgtgtgcagatcgct
ggcctgtgccatgacttgggtcacggcccgttttctcatatgtttgatggcatgttcatc
cctaaagtcagacctggtgagaaatggaagcatgaggtggcatcggttcagatgtttgac
cacctggtgaaggtcaacggtctggaggaggtcatggttcaccacgggttgactcttcct
gacgaccttatatttattaaggagcagatcgccggccccctggacaactccgtcttggac
agttcgtggccgtataagggcaggccgttggagaaatcgttcctgtacgagatagtagcg
aacaaaaggaacggcatcgacgtggataagtgggactatttcgcaagggactgctaccac
ctcggcattcagaacaactttgactaccagcgcttcctcaagtttgcgcgcgtgtgtgaa
gtgagaggaaagaaacatatctgcaccagagacaaggaagttggcaatctctatgacatg
tttcacactcgtaactgcctccatcggcgggcgtatcaacacaaagtggccaacatcatc
gagaccatgatagcggaggcttttgtaaaagctgatcctcatattcggatccagggctcc
tcggggaagatcttcaccatctcttcagctatagaagacatggaggcctacaccaaactc
acagatcacatatttgagcagattctgtactcgtctgagccagagctgtctgaggcgcga
gccatcctcaacaacatcgtctgcaggcggctgtataagtgtgtgggtcagaccacgccg
gagacgcatgtggacgcctcgcaggagaaacttctagactgggcgaaggaagtagcccgt
tcaaaacccagcggcacagacgccaacctgatagctgaggactttgtagttagtgtcatt
tacatggattatggaatgaaggagaaaaaccccatcaacaatgtccacttctactgcaag
aaagatcccaccaaagccataaagatccgcaaaaagcaggtgtccaaactcctgccggag
cgcttcgccgagcagctgatcagggtttactgtaagaagacagacgacaagagcctagaa
gctgctaagaagtactttgtccagtggtgcatggacaggaacttcaccaaaccccaggac
ggagatgtaattgctccagagctcactccactcaaacgtgactggcacacgctggagcga
gacgacgaggacagtgagccggatgacaacggtgaaggcgctcgtcccggaacgagagac
gaaacgcctagaaaggctggacgtcaagtgaaagtcaacctttttcaagctcagggagga
agcagactctga
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