Labeo rohita (rohu): 127162499
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Entry
127162499 CDS
T09007
Symbol
srfa
Name
(RefSeq) serum response factor a isoform X1
KO
K04378
serum response factor
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04010
MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
127162499 (srfa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lroh03000
]
127162499 (srfa)
Transcription factors [BR:
lroh03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box responders to external signals
127162499 (srfa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRF-TF
Motif
Other DBs
NCBI-GeneID:
127162499
NCBI-ProteinID:
XP_050961240
LinkDB
All DBs
Position
Unknown
AA seq
513 aa
AA seq
DB search
MLGGNGTARGAGRSGNGTGLTPLQVGSTSGALGAVNSAMNLPDGARYDDRPSVEAVLSGS
DGDSDSGDDEESSVVDRRGVKRERSEMEVGGSSGSNAGLSAGYGGVSTGVAGAKPGKKTR
GRVKIKMEFIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVLLLVASETGHVYTFATRK
LQPMITSETGKALIQTCLNSPDSPPRTDPSTDQRMSATGFEETDLTYQVSEADGLTEPKE
MIKPTFTAATLPGGGTSTNSITTQSSASSSPSSSSVSMHTQSSGASLSSTTCWPMNAQSV
SSANGTVLKSSPAGVMQLPGGFTLMPGASLPPGTHTIPLSQLQTHSLAIQCPQTQNSSTA
AASAVPAHTQAATQATLFRLPAAVSLTGGAMSQQLQAIQVHPSPQSSDSSPEISQTSTSS
TVSHTATIVTSSVPSSVAGHMMYPGAHVMYATSTPTLADGGLTVLNTFPQAPAAMHVSHT
QAQDSGAVPQMFLTGPPGTVQIPVSAVPLHSVI
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgttagggggaaacgggacggccagaggggctggacgctcaggtaacggcacggggttg
actcctctacaggtgggcagcacatctggggctttaggggcagtaaactctgccatgaac
ttgcccgatggggccagatacgacgacaggccgtcggttgaggctgtgctgagcggttcc
gatggagactcggattccggggatgatgaagagagttccgtggtggacaggagaggagtg
aagcgggagaggagtgagatggaggtcggaggatcctcgggatccaacgcaggactgtcg
gcggggtatggaggggtttccaccggggttgctggtgcgaaacccggcaagaaaacacga
ggacgggtgaaaattaagatggagtttattgacaacaagctgaggagatacacgaccttc
agcaagagaaagactggcattatgaagaaggcttatgaattatccaccctaacggggacg
caagttttgctcctggttgccagtgagacgggccacgtgtacacgtttgccacgcgaaaa
cttcagcccatgatcaccagtgaaacaggtaaagccctcatccagacctgcctaaattcc
cctgattctccgccccgtacggacccttcaacagaccagcggatgagtgccacgggattc
gaggagacagacctcacctaccaggtctcagaggctgatggtctcacagagccaaaggaa
atgatcaagccgacgttcacggctgccactttacccggcggcggcaccagcaccaacagc
atcaccacgcagtcgtcggcctcttcctctccctcgtcctcctcggtgtccatgcacact
cagagcagcggcgcgtcgctctccagcaccacctgctggcccatgaacgctcagagcgtc
tccagtgccaacggcacggtgctcaagagctctcccgcaggagtcatgcagctgcccgga
ggattcacgctcatgccaggcgcttctcttcctcccggcacacacactattcctctcagt
cagctgcagacacactctctggccattcagtgtccacagacgcaaaacagcagcaccgca
gccgccagcgccgtccccgcacacacacaggccgccacgcaggccacgctcttccgcctg
ccggccgccgtctcgctcacaggtggagcgatgtctcaacagttacaggccatccaggtt
caccccagtcctcaaagcagtgacagcagtccagagatcagccagacctccaccagctcc
actgtgagccacaccgctactatagtcacttcctcagtgccttcttcagtggccggtcac
atgatgtaccccggagcgcacgtcatgtacgctacatccacccctacccttgccgacggg
ggtctaactgtgctcaataccttcccacaagcgcccgccgcgatgcacgtgtcccacacg
caagcccaagactcaggtgcagttcctcagatgtttctcacgggacctcctggaactgta
cagatcccagtttcagccgttccactacattcggtaatatag
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