KEGG   Labeo rohita (rohu): 127162521
Entry
127162521         CDS       T09007                                 
Symbol
rbbp5
Name
(RefSeq) retinoblastoma-binding protein 5 isoform X1
  KO
K14961  COMPASS component SWD1
Organism
lroh  Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:lroh00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:lroh03036]
    127162521 (rbbp5)
Chromosome and associated proteins [BR:lroh03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    COMPASS/SET1 complex
     127162521 (rbbp5)
    COMPASS/SET1 complex (yeast)
     127162521 (rbbp5)
    MLL-HCF complex
     127162521 (rbbp5)
    MLL3/MLL4 complex
     127162521 (rbbp5)
SSDB
Motif
Pfam: WD40_WDHD1_1st WD40_Prp19 Beta-prop_EML_2 WD40_CDC20-Fz WD40 WDR55 Beta-prop_CAF1B_HIR1 Beta-prop_EML ANAPC4_WD40 EIF3I Beta-prop_IFT140_1st Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR19_1st Beta-prop_SPT8 Beta-prop_WDR90_POC16_2nd Beta-prop_HPS5 Beta-prop_RIG_2nd Beta-prop_IFT122_1st Beta-prop_LRRK2 Beta-prop_NUP159_NUP214 WDR54 Beta-prop_WDR75_2nd Beta-prop_SCAP Beta-prop_WDR75_1st Beta-prop_Vps41 Beta-prop_TEP1_C Beta-prop_WDR11_1st Beta-prop_RIG_1st
Other DBs
NCBI-GeneID: 127162521
NCBI-ProteinID: XP_050961262
LinkDB
Position
Unknown
AA seq 537 aa
MNLELLESFGQNYPEEADGTLDCISMALTCTFNRWGTLLAVGCNDGRIVIWDFLTRGIAK
IISAHIHPVCSLSWSRDGHKLVSASTDNIVSQWDVLTGDCDQRFRFPSPILKLQYHPRDM
DKVLVCPMKSAPVLLTLSDSKHVVLPVDDDSDLNVVAAFDRRGEYIYTGNAKGKILVLNT
NTQDLVASFRVTTGTSNTTAIKSIEFARKGSCFLINTADRIIRVYDGREILTCGRDGEPE
PMQKLQDLVNRTPWKRCCFSGDGEYIVAGSARQHALYIWEKSIGNLVKILHGTRGELLLD
VAWHPVRPIIASISSGVVSIWAQNQVENWSAFAPDFKELDENVEYEERESEFDIEDEDKS
EPEQTGADAAEDEEVDVTSVDPIPAFCSSDEELEDYKALLYLPIAPEVEDPEENPFGPPP
DAAGQNATPDDGSAHSGPGDKKQRQPSSDGGPPKKKIRTTTIELQGVPNDEVHPLLGVKG
DSKSKKKAAGRPKGSKGKDKDSPFRPKVCRDRAEGLVGTPGSLVAAAYKQHEVQGLD
NT seq 1614 nt   +upstreamnt  +downstreamnt
atgaatctggagctgctcgaatcgttcgggcagaattacccagaggaggctgatggcact
ctggactgcatcagtatggctctgacctgcacgtttaaccgttgggggacgctgcttgca
gtcggctgtaacgacggacgcatcgtcatctgggacttcctgacacgaggaatcgccaaa
atcatcagcgcacacatacaccccgtctgctcgctcagttggagcagagacggacacaag
ctagtcagcgcctccacggacaacatcgtgtctcagtgggacgtcctgacgggagactgc
gaccagcgcttccgcttcccctcgcccatcctcaagctgcagtaccaccccagagacatg
gacaaggtgctggtgtgtcccatgaagtccgcgcccgtcctgctcacgctgtccgactcc
aaacacgttgtgctgccggtggacgacgactcggatctgaacgtggtggcagcgttcgac
cggcgcggggagtacatttacaccggcaacgccaagggaaagattctggtgctgaacaca
aacacacaggaccttgtggcgtcattcagagtgacgacaggaaccagcaacaccaccgcc
atcaaatccatcgagttcgcacgcaagggcagctgtttcctcattaacacggcagaccgc
atcatccgagtgtacgacggccgagagatcctgacgtgcggcagagacggagaacctgaa
cccatgcagaaactacaggacctggtcaacaggacgccgtggaagcgctgctgtttttcg
ggtgacggcgagtacatcgtggcgggttcggcgcggcagcacgcactctacatctgggag
aagagcatcgggaacctggtgaagatcctccacgggacacgaggagagctactgctggac
gtcgcctggcatccggtgcggccgatcatcgcgtccatctccagcggtgtggtgtccatt
tgggcccagaaccaagtggaaaactggagcgcgtttgcgccggactttaaagagctggat
gagaatgtggagtacgaggagagagaatcagagtttgacatcgaggacgaggacaagagc
gaaccagagcagaccggtgcggacgctgcggaggacgaggaggtggacgtcacatcagtc
gatccaatcccagcattctgcagcagtgacgaggagctggaggactataaagcgctgctg
tatctgcccatcgctccagaggtggaggaccctgaggagaacccgttcggtcctccgcct
gacgctgcgggtcagaatgccacacccgatgatggctccgcccacagcggccccggcgac
aaaaaacagcgacagccctcgtctgatggagggccgcccaagaagaagatccgcaccaca
accatcgagctgcagggcgtcccgaacgacgaggtccatccgctgctgggtgtgaagggt
gacagtaagtccaagaagaaggcggcggggcggcccaagggatctaaaggtaaagacaaa
gactctccgttcagacccaaagtctgccgggacagagcagaggggctggtggggacgcca
ggaagtctggtcgcggcggcgtacaagcagcatgaggttcagggtttggactga

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