Labeo rohita (rohu): 127162552
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Entry
127162552 CDS
T09007
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 2
KO
K05045
solute carrier family 6 (neurotransmitter transporter, betaine/GABA) member 12
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
127162552
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lroh02000
]
127162552
Transporters [BR:
lroh02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
127162552
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
127162552
NCBI-ProteinID:
XP_050961302
LinkDB
All DBs
Position
Unknown
AA seq
588 aa
AA seq
DB search
MDRIEGQLEERGYWGSKAEFLLAVAGNVVGLGNVWRFPYLCYKYGGGAFLIPYLVFVFTC
GVPLFLLETAMGQYTQEGGITCWHRLCPLAEGIGYAGQLIILYSCMCYIIILAWALFYLI
FSFSSQLPWASCDNSWNTDDCVNLAAKNLTLNQTMLNNSTPAATEFWERRVLSLSGGIEE
IGKINWEILLCLIAVWIICYFSIWKGVKSTGKVVYFTATFPYVMLLVLLIRGLTLPGALQ
GVVFYLYPEPARLSDPQVWLEAGAQILFSYSVSVGTLTVLASYNKYNNNCYRDSLWLCLL
NSCTSFVAGFAVFSVLGFMAQEQGVPIAQVAESGPGLAFIAYPQAVAMMPLPQFWAVCFF
IMIILLGLDTQFALVEAIMTSVMDLFPMILRRAGRRESFLLLLCLTCILGQFIMVTEGGM
YVFQLFDYYACNGACVLFLSVFESLAMGWIFGAERMFDIIEDMTKSRPNYMLMLCWKYLT
PLVTLVSFVYSMMEYKPLTFNRWYVYPDWAYALGWLLALSSILLVPGWALGRLFAGKGSL
KQRWRHLCSPDTELPLTCKRRAEMKETVFTTEMENLFRTDTNEHENGH
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atggacagaatagaaggacagttagaggagagagggtattggggcagtaaagcagagttt
cttctggctgtggcagggaatgttgttggtctgggtaacgtgtggaggtttccgtacctc
tgctacaagtatggaggaggggcgtttctgataccctacctggtgtttgtgtttacctgt
ggggttcctctgttcctgctagagacggctatgggacagtacacacaggaaggaggcatt
acatgttggcatcggctctgtccactagctgagggtattggctatgcaggacaactgatt
attctgtatagctgcatgtgttacatcattattctggcctgggcgcttttctacctcatc
ttctctttcagctcccaactgccatgggccagctgtgacaactcctggaatacagatgac
tgtgtaaatcttgctgcaaagaatctgaccctcaaccagacaatgctgaataattcaaca
cctgcagctactgagttctgggaacgcagagtgctgtctctctctggagggattgaggag
atcggtaagatcaactgggagattcttctgtgtcttattgcagtgtggatcatatgttat
ttcagcatctggaaaggagtcaaatctacaggcaaggtggtgtatttcacagccacattt
ccttacgtgatgctgcttgtgttgctgattcgtgggttgactcttcctggagctctgcag
ggtgttgtgttttacctgtaccctgaaccagcccgtctttctgacccacaggtttggttg
gaggccggagctcagatcttattttcctacagtgtgtctgttggcactctcactgtttta
gccagctacaataaatacaacaacaactgctacagggacagcttgtggctttgccttctg
aacagttgcaccagttttgtggctggttttgctgtgttctcagtcttgggcttcatggcc
caagagcagggcgtccccattgcacaggtggcagaatcaggtccaggactagcgttcata
gcttatccacaggcagtagctatgatgcctctccctcagttttgggctgtttgtttcttt
attatgattattttgctggggctggatacacagtttgctttagtggaagccatcatgacg
tcagtgatggacctgttccccatgattctgcgcagagcaggacggcgagaaagtttcctc
ctgcttctctgtctcacctgcatcttgggccaattcatcatggttacagagggggggatg
tatgtattccagttgtttgactactatgcctgtaatggagcctgtgtactgttcctgtct
gtgtttgagtctctggccatgggttggatttttggggctgagaggatgtttgacatcatt
gaagacatgacaaagtcacgacccaactacatgctcatgctgtgctggaaatacctgact
cctcttgtgaccctggtgtcttttgtttattctatgatggagtacaagcccctcactttt
aaccgctggtatgtgtacccagactgggcgtatgcactaggctggttactggccctgtcc
tccattctgctggtgcctggatgggcacttggtcgactgtttgctgggaaagggagtctg
aaacagcgttggcgtcacctgtgtagtcctgatacagagcttcctctcacctgtaaacga
agagctgaaatgaaggaaactgttttcaccacagagatggaaaacttatttaggacagac
acgaatgaacatgaaaatggacactga
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