Labeo rohita (rohu): 127162578
Help
Entry
127162578 CDS
T09007
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM39
Organism
lroh
Labeo rohita (rohu)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
PRY
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_2
U-box
zf-C3HC4_3
zf-C3HC4_4
zf-RING_2
zf-RING_5
Prok-RING_4
zf-RING_6
zf-Nse
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
127162578
NCBI-ProteinID:
XP_050961331
LinkDB
All DBs
Position
Unknown
AA seq
573 aa
AA seq
DB search
MAESSPTKAEKNRRQRRDESPLMSSSSEPLTEELQCSICLDVFTDPVSTPCGHNFCKTCL
NKHWDNSQTCNCPYCKETFKQRPDLKINTTLREVVDHYKKKRPEKKSAIISEVVCDYCEE
TKLKALKSCVVCQSSYCETHLQPHLRVAGLKKHKLMDPVSNLEDYICQKHERPLELFCRD
DQTCVCLMCTATDHKNHNTVPIEEESEEKKTQLIKTQKDVQQMIQDKIKKIQDIKNSAEI
RKQRDTEKEKAAHVELFTDLIRSIERCQTELLEMMEEQQKAAEKQEQELIEDLEKDITEL
KMRNMELEHLSHTEDHLHLLQMYSFLCTPTNTRKWPEISMKTHGSLETLRRVLTQLQDTL
NRKISHSVFGERSVIPGTCCSHELKWMQQYAVDVTLDLDTAHPKLILSDDRKQVRHGGIG
KKLPDNPKRFDTDVSVLGKEGFSSGRFYFEVQVKRKTKWDLGVARESIKRKGDIPLNPSN
GCWAVWLRNGNEYKALSSPSVSLHLKVKPQRVGVFVDYEEGLVSFYDVESISHIYSFTGQ
SFTDKLYPFFSPCLNDGGKNSSPLIITPVIHDT
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atggcagaatcttcaccaacaaaagcggaaaaaaacaggagacagaggagagatgaatcc
ccattaatgtcatcctccagtgaaccactgactgaggagcttcagtgctctatatgtctg
gacgtgttcactgatccagtcagcactccatgtggacacaacttctgcaagacctgtctg
aataaacactgggacaacagccagacctgcaactgtccatattgtaaagaaacattcaag
caaagacctgatctcaagattaataccacactcagagaggtcgtagatcactataaaaag
aaacgtcctgaaaaaaaaagtgcgattattagtgaagttgtgtgtgactattgtgaggaa
acaaagctgaaagccctaaagtcgtgtgtggtgtgtcagagctcttactgtgaaactcac
ctgcagcctcatttgagagtggcaggtttaaagaaacacaaactgatggatcctgtgagt
aatctggaggactatatatgtcagaaacatgagagacctctggagctgttctgtagagat
gatcagacatgtgtgtgtctgatgtgcactgcgacagaccacaagaaccacaacactgtt
cctatagaggaagagagtgaagagaagaagactcaactgataaagacacagaaagatgtg
cagcagatgatccaggacaaaattaagaagattcaagacatcaaaaactcagcagaaatc
agaaagcagagagacacagagaaggagaaagcagcccatgtcgagctcttcactgatctc
atccgctccattgagagatgtcagactgaactgctggagatgatggaggagcagcagaaa
gcagcagagaaacaggagcaagagctcattgaagatctggagaaggatatcactgagtta
aagatgagaaacatggagctggagcacctctcacacactgaagatcacctccacctccta
cagatgtactcattcctgtgcacccctacaaacaccaggaagtggcctgagatcagtatg
aagactcatgggagtctggagactctgaggagagtgctgactcaactgcaggacactcta
aacaggaaaatcagtcattcagtatttggagaacgttctgtgatcccaggaacatgctgc
tcacatgaactgaagtggatgcagcagtatgcagtggatgtgactctggatcttgatacg
gctcatcctaaactcatcctgtctgatgatagaaaacaagtgagacacggagggattgga
aagaaactcccagacaacccaaagagatttgatacagatgtctctgtcctgggaaaggag
ggattctcttcagggagattttattttgaggtgcaagtgaagagaaagactaaatgggat
ttaggagtggctagagaatccattaaaaggaagggagatatcccactgaatcctagtaat
ggatgctgggctgtgtggctgaggaatgggaatgaatataaagctctctctagtccctct
gtctctctgcatctgaaagtgaagccacagcgggtcggtgtgtttgtggattatgaggag
ggcctggtttctttttatgatgtggagtccatctctcatatctactctttcactggtcag
tctttcactgacaaactctatccattttttagcccatgccttaatgatggaggtaaaaac
tcgagcccactgatcatcacacctgtcattcacgatacgtga
DBGET
integrated database retrieval system
