Labeo rohita (rohu): 127162587
Help
Entry
127162587 CDS
T09007
Name
(RefSeq) LOW QUALITY PROTEIN: NACHT, LRR and PYD domains-containing protein 3-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
lroh04054
]
127162587
Pattern recognition receptors [BR:
lroh04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
127162587
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
FISNA
NLRC4_HD2
PRY
NOD2_WH
LRR_6
SPRY
LRR_4
Motif
Other DBs
NCBI-GeneID:
127162587
NCBI-ProteinID:
XP_050961338
LinkDB
All DBs
Position
Unknown
AA seq
1150 aa
AA seq
DB search
MSLHEKREEEDGVQTHKAASPEPSCVSMKSNRSMVTPPEFSDGAMTSDPDTACKKSFFEK
SEEKKDVKAISPEPSCLSMKSNRSMVTPLEFSGGAVTSDPEVKRDDVIRSVTSCLICTSS
NSQTLIRQRVEDQHKTSMKNKYERLFEGIKLQVNHTLLKRIYTQLYIIEEESEGVNEEHE
VLQMEKRPTTQDTPIYCNDIFKPLHQPGHEEKDKIKTVLTKGIAGIGKSVSVQKFILDWA
EGKANQDVDFMFVLPFREMNLIEDHQYSLHRLLLDFHPELQDLDPKIYEECKVVFIFDGL
DESRVTLMFSDIEKVCDVNESSSVGVLMSNLIRGELLPSALIWITSRPAAARQIPSKYIH
RVTEIQGFSEPQKEEYFRKRISDKHQASRIISHIRSSRSLNIMCHIPVFCWISATVLQKL
LKQDESAEIPQTLTEMYIHFLLTQINMRNQKYDERNPEKRLKFNREVIVKLAELAYKQLM
KGNVMFYEEDLIESGIDVTDASVYSGICTEIFKEESVIHQRKVYCFIHLSCQEFLAAFFV
FYSHVVKHSESLKLFLNEELHRNICASTLFELLKTTVNQSLQSRNGHLDLFLRFLLGVSL
ESNQRLLQDLLTHTVNSSYSIKNTIRYIQDTIKGDERLSADRCISLFLCLLELKDQTLYR
EIQEFVKSQNHSVNRLSLSHCSTITYMLQVSEEVLDEFDLKKYNTSDEGRRRLIPAMVIC
RIALLSWCNLTGQFCESLSSSLQSSNSLRELDLSHNDLQDSAVKLLSDALKSSHCHLNIL
RFAGCNLTGQCCESLSSSLQSSNSLRELDLSHNDLQNKGVKLLSDGLKNSHCQLNTLRVT
SCNLSDQCCESLSLCLQSSNSLRELDLSNNDLQDSGMKLLSDGLKSSHCHLNILRLSGCM
VTEEGCCFLASALSSNPSHLRELDLSYNHPGQTLVKLLSDPNYRLEKLNVDHGGEIRITT
GIKKYTCCDLTLDLNTAHPQLTLSEMNRTVEFVKEKQSYPDHPERFNKCYQVLCKESLSE
RCYWEAEWCGRAVYVSVGYKGISRKGYSDNCWFGFNEKTWSLNWFIDRFTVSHRNKITEI
SAPSCGSNRVGVYLDWSAGTLSFYSISETNTLTHLHTFNSTFIEPLYAGFTVFYDTSVSL
CDINHVKQRQ
NT seq
3453 nt
NT seq
+upstream
nt +downstream
nt
atgagtctccatgagaagagagaagaagaggatggtgttcagacacataaagcagcatct
ccagaacccagctgtgtgtctatgaagagtaacaggtctatggtgaccccccctgaattc
agtgatggagcaatgacctctgaccctgacactgcctgtaaaaagagtttctttgagaag
agtgaggagaagaaggatgttaaagcaatatctccagaacccagctgtttgtctatgaag
agtaaccgatccatggtgaccccccttgaattcagtggtggagcagtgacctctgaccct
gaagtgaagagagatgatgtgatcaggtcagtgacgtcctgcctgatttgcactagctcc
aactctcagaccctcatcaggcagagagtcgaagaccagcacaaaaccagcatgaagaat
aagtatgaaagattatttgagggaatcaaactacaggtgaatcacaccctcctgaagagg
atctacacacagctctacatcatagaggaagagagtgaaggagtgaatgaagaacatgag
gttttacagatggagaaaagacccacaacacaagacactccaatctactgcaatgacatc
tttaaacccttacatcaaccaggacatgaggagaaagacaaaatcaagactgttcttact
aaaggcattgctggaattggaaaatctgtctctgtgcagaagttcattctggactgggct
gagggaaaagccaatcaggatgtagatttcatgtttgtgcttccatttcgagagatgaac
ttgattgaagatcaccagtacagtcttcacagacttctgctggactttcatcctgaactt
caagatctggacccaaagatttatgaggagtgtaaagttgtgttcatctttgatggtctg
gatgaaagcagagtgacactgatgttttcagacattgaaaaagtttgtgatgtgaatgag
tcttcatcagtgggtgtgttgatgtcaaacctcattagaggagagctgcttccctctgct
ctcatctggatcacctccagaccagcagcagccagacagatcccctcaaaatacatacac
cgtgttacagaaattcagggattcagtgagcctcagaaggaggaatatttcaggaagaga
atcagtgacaagcatcaagccagcagaatcatctcacacattagaagctcaagaagcctc
aacatcatgtgtcacatacccgtcttctgctggatctcagccactgtgcttcaaaaactc
ctaaaacaagatgaaagtgcagaaatccctcaaactctgactgaaatgtacatccacttc
ctactgactcagatcaacatgaggaatcagaagtatgatgagagaaatccagagaaacgc
ctgaagttcaacagagaagtgattgtgaaacttgctgaactggcttacaaacagctgatg
aagggcaatgtgatgttctatgaggaggacttgattgagagcggcatagatgtcactgat
gcctcagtgtattctgggatttgtactgagatctttaaggaggaatctgtgattcatcag
aggaaagtctactgctttattcatctgagctgtcaggagtttctggctgctttttttgtg
ttttactcccatgttgtcaagcatagtgaatcacttaagttgtttctaaatgaagagtta
cacaggaacatttgtgcaagcactctgtttgagctactaaaaacaacagttaatcaatcc
ttgcagagtagaaatggacacctggatcttttcctgcgattcctgctgggcgtctcactg
gagtccaatcagagactcctacaggatctactgacacacacagtcaacagttcatacagc
atcaagaacaccatacggtacattcaagacacaatcaagggtgatgaacgtctctcagct
gacagatgcatcagtctgttcctctgtctgttggaattaaaggatcagactctgtacaga
gagattcaggagtttgtgaaatcacaaaatcactcagtaaatcgactctctctatctcac
tgctcaacaatcacctacatgcttcaggtatcagaggaggtgctggatgaatttgatctg
aagaaatacaacacatcagatgagggtagaaggagactgataccagctatggtgatttgc
agaatagctctactttcttggtgtaatctcactggtcagttctgtgaaagtttgtcttca
tctctacaatcatcaaactcactgagagagctggacctgagtcacaatgacctgcaggat
tcagcagtgaagcttctgtctgatgcactaaagagttcacactgtcatcttaacatactg
agatttgctggctgtaatctcactggtcagtgctgtgaaagtttgtcttcatctctacaa
tcatcaaactcactgagagagctggacctgagccacaatgacctgcagaataaaggagtg
aagctgctctcagatggactgaagaattcgcactgtcaacttaacacactgcgagtgaca
agttgcaatctcagtgatcagtgctgtgaaagtttgtctttatgtctacaatcatcaaac
tcactgagagagctggacctgagtaacaacgacctgcaggattcaggaatgaagcttctg
tctgatggactgaagagctcacactgtcatctcaacatactgagattatctggctgtatg
gtgacagaggaaggctgttgttttctggcttcagctctgagttcaaacccctcacacctg
agagagctggatctgagctacaatcacccaggacaaacattagtcaagctgctctctgat
ccaaactacagactggaaaaactcaatgtggatcatggaggagagatcaggattacaaca
ggaataaagaaatatacatgttgtgatctcacactggatttaaacacagcacaccctcaa
ctcaccctgtctgagatgaacagaacagtggaatttgtgaaagagaagcagtcgtatcct
gatcatccagagagattcaataagtgttatcaggttttgtgtaaagagagtctgtctgaa
cgctgttattgggaggctgaatggtgtgggagggcagtttatgtatcagtgggatataaa
ggaatcagcaggaaagggtacagtgataactgttggtttggattcaatgaaaagacttgg
agtctaaactggtttattgacagattcactgtcagtcacagaaataagattacagaaata
tctgccccttcatgtggctctaacagagtaggagtgtatctggactggtcggccggcact
ctgtccttctacagcatctctgaaacaaacacactcacacacttacacacattcaacagc
acattcattgaaccactctatgctggatttacagttttttatgatacttcagtgtctctg
tgtgatattaaccatgtaaaacagagacagtaa
DBGET
integrated database retrieval system
