Labeo rohita (rohu): 127162689
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Entry
127162689 CDS
T09007
Symbol
arpc1b
Name
(RefSeq) actin-related protein 2/3 complex subunit 1B
KO
K05757
actin related protein 2/3 complex, subunit 1A/1B
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04144
Endocytosis
lroh04517
IgSF CAM signaling
lroh04530
Tight junction
lroh04810
Regulation of actin cytoskeleton
lroh05100
Bacterial invasion of epithelial cells
lroh05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
127162689 (arpc1b)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
127162689 (arpc1b)
09144 Cellular community - eukaryotes
04530 Tight junction
127162689 (arpc1b)
09142 Cell motility
04810 Regulation of actin cytoskeleton
127162689 (arpc1b)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
127162689 (arpc1b)
05100 Bacterial invasion of epithelial cells
127162689 (arpc1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lroh04131
]
127162689 (arpc1b)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lroh04812
]
127162689 (arpc1b)
Membrane trafficking [BR:
lroh04131
]
Others
Actin-binding proteins
Arp2/3 complex
127162689 (arpc1b)
Cytoskeleton proteins [BR:
lroh04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Arp2/3 complex
127162689 (arpc1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
Beta-prop_THOC3
WD40
WD40_WDHD1_1st
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
Beta-prop_Aladin
Beta-prop_WDR35_TULP_N
Beta-prop_WDR19_1st
WDR55
Beta-prop_WDR3_2nd
WD40_Gbeta
Beta-prop_WDR75_1st
Beta-prop_HPS5
Beta-prop_WDR36-Utp21_2nd
Beta-prop_IFT140_1st
Beta-prop_EML
Beta-prop_TEP1_2nd
eIF2A
EIF3I
Beta-prop_IFT122_1st
PEP5_VPS11_N
RMC1_N
WDR90_beta-prop_4th
Beta-prop_SPT8
SH3_3
Tricorn_2nd
Motif
Other DBs
NCBI-GeneID:
127162689
NCBI-ProteinID:
XP_050961485
LinkDB
All DBs
Position
3:complement(11387831..11397328)
Genome browser
AA seq
369 aa
AA seq
DB search
MSYHSFLLEPISCHAWNKDRTQIALCPNNHEVHIYKKEGNNWNKIHVLKEHNGQVTGIDW
APESNRIVTCGTDRNAYVWTLKGDAWKPTLVILRINRAARCVKWSPKENKFAVGSGSRLI
SVCYFEQDNDWWVCKHIKKPIRSTILCLDWHPNNVLLAAGSCDFKCRIFSAYIKEVEEKP
APTPWGSKMPFGEVMFESTGTSGWVHGVCFSDSGNRVAWASHDSTVAVAEGGKTAVLASL
TSETLPLLCVTFITENSLVAAGHDCYPVLFVYDSNKAALSFGGKLDVPKQSAQKGMTARE
RFQNLDKKATADSKEAVLESVHKNSISQISVLNGGKAQCAKFCTTGMDGGMAIWDVKTLE
SAMKDLKIV
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgtcttatcacagttttctccttgaacctatcagctgccatgcctggaacaaggaccga
actcaaattgcactgtgtcctaataaccatgaagtccatatctacaagaaggagggaaac
aactggaacaaaatccatgtgctgaaggagcacaatggccaggttactggcattgactgg
gctccagagagcaatcgcattgtgacctgtggcactgaccgcaacgcatacgtctggacc
ctaaagggagacgcatggaagcccaccctggtcattctgaggatcaaccgtgccgcccgc
tgtgtgaaatggtctcctaaagaaaacaagtttgctgtgggcagtggctcacgtctgatc
tcagtctgctattttgagcaggataatgactggtgggtgtgcaagcacattaagaagccc
atccgctccaccatcctttgtttggactggcaccccaacaacgtccttttggcagctgga
tcatgtgacttcaaatgcaggatcttttctgcttacataaaagaagtagaagagaagcct
gctccaacaccatggggctctaaaatgccctttggagaggtcatgtttgaatctactgga
acctcaggttgggtgcacggcgtctgcttctcggacagcgggaatcgggtggcctgggcc
agccatgacagcactgtggcagtagctgagggaggaaagactgctgtcttagccagtctg
acttcagaaaccttgcctcttctgtgcgtgactttcattactgagaacagcctagtggca
gctggccatgactgctaccctgtgttgtttgtctacgattcaaacaaagcagccttgtct
tttggagggaaacttgacgtgcccaaacagagtgctcagaagggcatgacagccagagaa
cgcttccagaacctggataagaaagccaccgctgacagcaaagaagccgtcctggagtct
gtgcacaaaaacagcatcagccaaatctcagttcttaatggaggaaaagcacaatgtgcc
aaattctgcaccactggtatggatggaggcatggctatttgggatgtaaagacccttgaa
tctgcaatgaaggatctcaagattgtctag
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