Labeo rohita (rohu): 127162821
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Entry
127162821 CDS
T09007
Symbol
xylt1
Name
(RefSeq) xylosyltransferase 1
KO
K00771
protein xylosyltransferase [EC:
2.4.2.26
]
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
lroh00534
Glycosaminoglycan biosynthesis - heparan sulfate / heparin
lroh01100
Metabolic pathways
Module
lroh_M00057
Glycosaminoglycan biosynthesis, linkage tetrasaccharide
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
127162821 (xylt1)
00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
127162821 (xylt1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
lroh01003
]
127162821 (xylt1)
Enzymes [BR:
lroh01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.26 protein xylosyltransferase
127162821 (xylt1)
Glycosyltransferases [BR:
lroh01003
]
O-Glycan biosynthesis
Glycosaminoglycan
127162821 (xylt1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Xylo_C
Branch
Motif
Other DBs
NCBI-GeneID:
127162821
NCBI-ProteinID:
XP_050961637
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All DBs
Position
3:23460776..23543023
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AA seq
919 aa
AA seq
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MFGSLCARKLARRSRSALIAALTVLLVQTLIVWNFSSLDTGEDRKDNGREKRDRIGINKA
YSEYPKSGFQKRHHQPPLGKASIRHKQQPDGYYSHRPKEKVRVDSNNENSVPKDFENIDN
SNFGARSQTQRHAPGKHKQGLLEKAHAQQTLSKHSNEVIQYAQNKGGFNQTRTDLQRRAN
PTLRPHQSQQHRHHLQQAKRSAAPTADIKYDQPPKCEISGKEAISALSRAKTKECRQQIA
EVYCRHKERQLMPEKVTRYCPVEGKVNMNVQWEDDSMETVPAVPVRIAFMLVVHGRASRQ
VQRLFKAIYHTSHFYYIHVDQRSNYLHRQMLTLARQYPNVRVTPWRMSTIWGGASLLTMY
LQSMKDLLAMRDWSWDFFINLSAADYPIRTNDQLVAFLSKYRDMNFIKSHGRDNARFIRK
QGLDRLFFECDTHMWRLGDRKIPEGISVDGGSDWFLLNRMFVEYVINSQDDLVTNMKRFY
AYTLLPAESFFHTVLENSPHCESMVDNNLRITNWNRKLGCKCQYKHIVDWCGCSPNDFKP
SDLPRFQQTTRPTFFARKFEASVNQEIVNQLDGFLFGSLPQGTPGLKAYWENVFDEADGI
HSLSDAHLTHYHAFARLGLARTANSLQGDSSDNSCRYFSMGHPVSVHIYFLSDEFQGYLV
RHHATNLATSKLETLETWVMPKQFFKFTNPPNNFNRLQFAEIGTDWDAKERIFRNFGNLM
GPMDEPVGMQKWGKGSNVTVTVVWIDPTNVIAATYDILIDASAEFTHYRPPLNLPLRPGM
WTVRVLHHWSPVAETRFLITPLTHHKHLPIRQEDALKTHNGPAKNSYMEQSFHGLNPILN
IPVHLGQVEAAEHNAELTGSELERWVDSLVGEVWSAVDVCSTGPSGCPVMQTCRETVWSS
LSPDPKSQLGLPKTNGRIR
NT seq
2760 nt
NT seq
+upstream
nt +downstream
nt
atgttcggcagtctgtgtgcccgtaagctggctcgccgatcgcggtcagcgctaatagcc
gcgctgacagtgctgctggtccaaacgctcatcgtatggaacttcagcagtctggacacg
ggagaagaccgaaaagacaacggcagagagaagagggaccgaatcggcatcaacaaagcc
tacagcgagtacccgaagagcggcttccagaagagacatcaccagccgccgctggggaaa
gcgtctattcgacataaacagcaaccggacggctactattcgcaccggcccaaggagaaa
gtccgcgtagacagcaacaatgaaaactccgttcccaaagactttgagaatatagacaac
agtaatttcggggcacgttcgcagacacagagacacgcgcccggcaagcacaaacaaggc
cttctggagaaggcgcatgcacagcaaaccctgagcaagcactccaacgaggtcattcag
tatgcacagaataaaggtggcttcaatcagacacgcaccgacctccagcggagggccaat
cccaccctccgtccacatcaatcccagcagcaccggcaccaccttcagcaggccaagcgg
tcggccgcgcccactgccgacattaagtacgatcaaccacccaaatgcgagatcagcggc
aaagaggctatctccgccctatctcgagccaagaccaaggagtgccggcagcagatagca
gaggtttactgccgccacaaagaacgccagctcatgcctgagaaggtcacccgttactgc
cccgtggagggcaaagtgaatatgaatgtgcaatgggaggacgactctatggagactgtg
cctgcggtaccggtgcggatagccttcatgttggtggtccacggacgggcctcacgccag
gttcagcgcctcttcaaggctatataccacacgtctcatttctactacattcatgtggac
cagcgatccaactacctgcacaggcagatgttgactctggctcgccagtatcccaacgtc
cgggtcacaccgtggcgcatgtctacgatatggggtggtgccagtctgctcaccatgtat
ctgcagagcatgaaggaccttctggccatgcgagattggtcctgggatttcttcatcaac
ctgagtgctgctgattacccaatcaggaccaatgatcagctggtggccttcctgtccaaa
tacagagatatgaatttcatcaagtcccacgggagagataacgctcgattcatcagaaaa
caaggtttggaccggcttttcttcgagtgtgacacccatatgtggcggcttggagacagg
aagattccagaaggcatatccgtggatggaggctctgactggtttctgctaaaccgaatg
ttcgtggagtatgtcatcaactctcaagatgaccttgtgaccaacatgaagcgtttctac
gcgtacacactcttacctgcagagtcgttcttccacacggtcctggagaacagcccgcac
tgcgagagcatggtggacaacaaccttcgcatcactaactggaatcgaaagctgggctgc
aagtgccaatacaagcacatcgtggactggtgcggctgctcgcccaatgacttcaagccc
tcagacctgccccgtttccagcaaaccaccaggcccacattcttcgcaaggaagtttgaa
gccagtgtaaatcaagagatagtgaatcaactggatggcttcctgttcgggagtttgccc
cagggcacgccgggtctcaaggcctactgggagaatgtttttgatgaagcggatggtatt
cacagcctgtccgacgcacatctcactcactatcatgccttcgcccgattgggtctggca
cggactgccaactctttacagggtgacagcagtgacaacagctgcaggtatttttccatg
ggacatcctgtgtctgtacacatctacttcctgtctgatgagttccagggatacctggtc
aggcatcatgccaccaacctggcaaccagcaaactggaaactcttgagacttgggtcatg
cctaaacagttcttcaagttcaccaatccacccaataacttcaacagactgcagtttgca
gagattggaacagactgggatgctaaggaaaggatattccggaactttggcaatctgatg
ggacccatggacgagcctgtgggaatgcagaaatgggggaaagggtcaaatgtgaccgtg
actgtggtgtggatcgaccccaccaatgtcatcgccgccacctacgacatcctgatcgac
gccagtgctgaatttactcactacaggcctccactgaacctgcccttgcggcccggcatg
tggaccgtacgtgtgctgcaccactggagccctgtggcagagacgcgctttctgatcact
cccctcacccaccacaaacacctgcctatacgccaagaggatgctttaaaaacgcacaat
gggccggccaagaacagctacatggagcagagtttccatgggctgaaccctatcctcaac
atcccggtccacctgggtcaggtagaagcggccgaacacaacgcggagcttacggggtcc
gagctggagcgctgggtggacagtctagtgggcgaggtgtggtcagctgtggacgtgtgt
tcaacgggccccagtggctgtccggtcatgcagacttgcagggaaacggtgtggagctct
ctcagcccggacccaaagtcccagctgggcctacccaaaaccaacggacgaatcaggtag
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