Labeo rohita (rohu): 127162864
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Entry
127162864 CDS
T09007
Symbol
rangap1a
Name
(RefSeq) ran GTPase-activating protein 1a
KO
K14319
Ran GTPase-activating protein 1
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
127162864 (rangap1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lroh03019
]
127162864 (rangap1a)
Messenger RNA biogenesis [BR:
lroh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
127162864 (rangap1a)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
RanGAP1_C
LRR_6
Nop14
SDA1_dom
ThiS-like
CobT
4HB_RdRP3_N
BUD22
Motif
Other DBs
NCBI-GeneID:
127162864
NCBI-ProteinID:
XP_050961719
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Position
3:complement(43185995..43194066)
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AA seq
579 aa
AA seq
DB search
MASDAVANLADSLAKTQVDEGELSYKGQGLKLDNAQSVEKMVKEIEEFDGLRALRLEGNT
IGVEAAQTIAKALETKSDLQCCHWSDMFTGRLRAEIPPALVSLGDALITAGARLKVLDLS
DNAFGPDGVKGIEKLLKSAACHTLQELRLNNCGMGIGGGKILAAALTVCHKESSALGAPL
QLKVFIAGRNRLENDGATALAHAFQLIGSLEEVHMPQNGINHQGVTALATAMEHNPQLRV
LNLNDNTFTKRGAIAMAQALKHLRNVQVINFGDCLVRSEGASAIAETLKEGLPILKELNL
SFGEITEEAALEVARSVQHKDQLKRLDLNGNSLGEEGCENLKEVMESMNMGDKLGSLSDD
EGEPEEDEDEEEDEDDDDEDVEEEEEEEVEEEEEEEGEGEEEKSELNQFSTPPSAPRTPD
VSSFLSFPSPDKLLRLGAKRSSLIQQQVDVLDVSKTAEAFLKISSVYKEDDAELKSAVLE
SIDAVLSKAFLTPSFQGLSFVSSLLVMLGLLKSEDKLKPVKVVPGHLQCLEHAVKQSYFP
REHITVLNAFMARPNKSLEVCSSARDRLKSTLQKLTPES
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atggcatctgatgctgtggcaaatctcgccgactcattggcgaaaactcaagtcgatgag
ggcgagctcagttataaaggacaaggcctgaaactggacaatgctcagtctgtggagaag
atggtaaaggagattgaggagtttgacggtctgcgtgcgctcagactagagggaaacacc
atcggtgtggaggcagcgcagaccatcgctaaagctctggagacgaagagcgacctgcag
tgctgccactggagtgacatgtttaccggccgcctgcgagctgagattcctccagcgctg
gtttctctgggcgatgcgttaatcacggctggagctcggctgaaggttctggatctgagc
gataacgcttttggacccgacggcgtgaaaggcatcgagaagctgctcaagagtgcagcc
tgccacacgctgcaggaactgcgcctgaacaactgtggaatgggcatcggaggaggaaag
atactggcagcagctctgactgtgtgtcataaggaatcgagtgcgcttggagcccccttg
cagctgaaggtgttcatcgcaggcaggaacagactggagaatgatggagcaacagcgctg
gcacatgcctttcagttgattggcagtttggaggaagtgcacatgccccagaatggcatt
aatcaccaaggagtcacagctttagccacagcaatggagcacaacccacaactgcgagtc
ctgaacctcaacgacaacaccttcaccaagagaggagcgatcgccatggcacaggcactg
aaacacctgcgcaatgtgcaagtgatcaattttggtgactgtcttgttcggtctgaagga
gccagtgccatagcagagaccctaaaagaaggactgccgattcttaaggagctgaatttg
tcttttggggaaatcacagaggaagctgcactggaagtggctcgatctgtccagcacaaa
gatcagttaaagagacttgacctgaacggtaacagtcttggtgaagaaggctgtgaaaat
ctgaaagaagtgatggagagcatgaacatgggagacaagctgggctctctgagtgatgac
gagggagaacctgaggaagatgaagatgaggaggaggacgaggatgatgatgatgaggat
gtggaggaggaagaggaggaggaagtagaagaagaagaagaagaggagggagaaggagag
gaagaaaagagtgaattaaatcagttttcaacgccgccttcagcacctcgtactccggac
gtctcgtctttcctgagctttccttctccagacaaactcctgcgactcggcgcaaagaga
agctccctcattcagcaacaggtggacgtgttggatgtgagtaagacagcagaagcattt
ctgaagatctcgtctgtgtacaaggaagacgacgcagagttgaaatcggccgtcctggag
agcatcgatgcagtgctgagtaaagccttccttacaccttccttccagggcttgagtttt
gtgtcatcgttactggtgatgctcggactcttgaagagtgaggacaagctgaagcctgtg
aaggtcgtcccaggacatctacagtgtttggagcatgcagtgaaacagagttatttccct
agagaacacattactgtcctgaatgccttcatggccaggccgaataaatcgctggaggtg
tgcagcagtgctcgagaccgtctgaaatccaccctgcagaaactcacacctgagagctga
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