KEGG   Labeo rohita (rohu): 127162864
Entry
127162864         CDS       T09007                                 
Symbol
rangap1a
Name
(RefSeq) ran GTPase-activating protein 1a
  KO
K14319  Ran GTPase-activating protein 1
Organism
lroh  Labeo rohita (rohu)
Pathway
lroh03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:lroh00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    127162864 (rangap1a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lroh03019]
    127162864 (rangap1a)
Messenger RNA biogenesis [BR:lroh03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     127162864 (rangap1a)
SSDB
Motif
Pfam: RanGAP1_C LRR_6 Nop14 SDA1_dom ThiS-like CobT 4HB_RdRP3_N BUD22
Other DBs
NCBI-GeneID: 127162864
NCBI-ProteinID: XP_050961719
LinkDB
Position
3:complement(43185995..43194066)
AA seq 579 aa
MASDAVANLADSLAKTQVDEGELSYKGQGLKLDNAQSVEKMVKEIEEFDGLRALRLEGNT
IGVEAAQTIAKALETKSDLQCCHWSDMFTGRLRAEIPPALVSLGDALITAGARLKVLDLS
DNAFGPDGVKGIEKLLKSAACHTLQELRLNNCGMGIGGGKILAAALTVCHKESSALGAPL
QLKVFIAGRNRLENDGATALAHAFQLIGSLEEVHMPQNGINHQGVTALATAMEHNPQLRV
LNLNDNTFTKRGAIAMAQALKHLRNVQVINFGDCLVRSEGASAIAETLKEGLPILKELNL
SFGEITEEAALEVARSVQHKDQLKRLDLNGNSLGEEGCENLKEVMESMNMGDKLGSLSDD
EGEPEEDEDEEEDEDDDDEDVEEEEEEEVEEEEEEEGEGEEEKSELNQFSTPPSAPRTPD
VSSFLSFPSPDKLLRLGAKRSSLIQQQVDVLDVSKTAEAFLKISSVYKEDDAELKSAVLE
SIDAVLSKAFLTPSFQGLSFVSSLLVMLGLLKSEDKLKPVKVVPGHLQCLEHAVKQSYFP
REHITVLNAFMARPNKSLEVCSSARDRLKSTLQKLTPES
NT seq 1740 nt   +upstreamnt  +downstreamnt
atggcatctgatgctgtggcaaatctcgccgactcattggcgaaaactcaagtcgatgag
ggcgagctcagttataaaggacaaggcctgaaactggacaatgctcagtctgtggagaag
atggtaaaggagattgaggagtttgacggtctgcgtgcgctcagactagagggaaacacc
atcggtgtggaggcagcgcagaccatcgctaaagctctggagacgaagagcgacctgcag
tgctgccactggagtgacatgtttaccggccgcctgcgagctgagattcctccagcgctg
gtttctctgggcgatgcgttaatcacggctggagctcggctgaaggttctggatctgagc
gataacgcttttggacccgacggcgtgaaaggcatcgagaagctgctcaagagtgcagcc
tgccacacgctgcaggaactgcgcctgaacaactgtggaatgggcatcggaggaggaaag
atactggcagcagctctgactgtgtgtcataaggaatcgagtgcgcttggagcccccttg
cagctgaaggtgttcatcgcaggcaggaacagactggagaatgatggagcaacagcgctg
gcacatgcctttcagttgattggcagtttggaggaagtgcacatgccccagaatggcatt
aatcaccaaggagtcacagctttagccacagcaatggagcacaacccacaactgcgagtc
ctgaacctcaacgacaacaccttcaccaagagaggagcgatcgccatggcacaggcactg
aaacacctgcgcaatgtgcaagtgatcaattttggtgactgtcttgttcggtctgaagga
gccagtgccatagcagagaccctaaaagaaggactgccgattcttaaggagctgaatttg
tcttttggggaaatcacagaggaagctgcactggaagtggctcgatctgtccagcacaaa
gatcagttaaagagacttgacctgaacggtaacagtcttggtgaagaaggctgtgaaaat
ctgaaagaagtgatggagagcatgaacatgggagacaagctgggctctctgagtgatgac
gagggagaacctgaggaagatgaagatgaggaggaggacgaggatgatgatgatgaggat
gtggaggaggaagaggaggaggaagtagaagaagaagaagaagaggagggagaaggagag
gaagaaaagagtgaattaaatcagttttcaacgccgccttcagcacctcgtactccggac
gtctcgtctttcctgagctttccttctccagacaaactcctgcgactcggcgcaaagaga
agctccctcattcagcaacaggtggacgtgttggatgtgagtaagacagcagaagcattt
ctgaagatctcgtctgtgtacaaggaagacgacgcagagttgaaatcggccgtcctggag
agcatcgatgcagtgctgagtaaagccttccttacaccttccttccagggcttgagtttt
gtgtcatcgttactggtgatgctcggactcttgaagagtgaggacaagctgaagcctgtg
aaggtcgtcccaggacatctacagtgtttggagcatgcagtgaaacagagttatttccct
agagaacacattactgtcctgaatgccttcatggccaggccgaataaatcgctggaggtg
tgcagcagtgctcgagaccgtctgaaatccaccctgcagaaactcacacctgagagctga

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