Labeo rohita (rohu): 127163021
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Entry
127163021 CDS
T09007
Symbol
cldnk
Name
(RefSeq) claudin k
KO
K06087
claudin
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh03272
Virion - Hepatitis viruses
lroh04382
Cornified envelope formation
lroh04514
Cell adhesion molecule (CAM) interaction
lroh04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
127163021 (cldnk)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
127163021 (cldnk)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
127163021 (cldnk)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
127163021 (cldnk)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
lroh03037
]
127163021 (cldnk)
04147 Exosome [BR:
lroh04147
]
127163021 (cldnk)
Cilium and associated proteins [BR:
lroh03037
]
Other cilia and associated proteins
Stereociliary proteins
127163021 (cldnk)
Exosome [BR:
lroh04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
127163021 (cldnk)
Exosomal proteins of colorectal cancer cells
127163021 (cldnk)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
Colicin_V
Clc-like
Motif
Other DBs
NCBI-GeneID:
127163021
NCBI-ProteinID:
XP_050961976
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All DBs
Position
3:4304542..4305428
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AA seq
216 aa
AA seq
DB search
MATTGMQLLGLVLSIIGWVGGFLVCTLPMWRVTAFIGNNIVTAQITWEGLWMNCIWQSTG
EIQCKVYDSLLALPSDMKAARGLTVLALLICTLALTLGILGIKCTECVGLPSLKARLARV
SGVLFVIAGFLILVPVCWTAHSIIRDFYDPYVAAPHKRELGPALYLGWGGSALLLIGGSL
LYAGSNPPGIPSSPTFSSGESSPRRAGGAAQVKGYV
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atggcaactaccggcatgcagctgctcggcctggttctgtccatcataggctgggtgggc
gggttcctggtgtgcaccctgcccatgtggagggtcaccgccttcatcggaaacaacatt
gtaacggcgcagatcacatgggagggcctgtggatgaattgtatttggcagagcacaggt
gagattcagtgcaaggtctatgacagcttgctggctcttcctagtgacatgaaggccgct
cggggtttgacggttcttgctttgctcatctgcaccctggcactcacgctgggtattctg
ggtatcaagtgcaccgagtgcgtgggtctgccaagcctcaaggcgcgcttggcccgcgtg
tctggcgtgctctttgtcatcgcagggttcctcatccttgttcctgtctgctggacggcc
cattccatcatcagggatttctatgacccctatgtggcggcccctcacaaacgtgagctc
ggccctgcactctacctgggctggggtggttcggctttgctgttgatcggtggctctcta
ctctacgcagggtccaatccacctgggattccctcttctcctacatttagtagcggcgag
agcagcccacgtcgagcgggaggagcagcccaggtcaagggttatgtttaa
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