Labeo rohita (rohu): 127163042
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Entry
127163042 CDS
T09007
Symbol
itga3a
Name
(RefSeq) integrin alpha-3
KO
K06482
integrin alpha 3
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04510
Focal adhesion
lroh04512
ECM-receptor interaction
lroh04810
Regulation of actin cytoskeleton
lroh04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
127163042 (itga3a)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
127163042 (itga3a)
09142 Cell motility
04820 Cytoskeleton in muscle cells
127163042 (itga3a)
04810 Regulation of actin cytoskeleton
127163042 (itga3a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lroh04147
]
127163042 (itga3a)
04515 Cell adhesion molecules [BR:
lroh04515
]
127163042 (itga3a)
04090 CD molecules [BR:
lroh04090
]
127163042 (itga3a)
Exosome [BR:
lroh04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
127163042 (itga3a)
Cell adhesion molecules [BR:
lroh04515
]
Integrins
Integrin alpha subunits
127163042 (itga3a)
CD molecules [BR:
lroh04090
]
Proteins
127163042 (itga3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_1
Integrin_A_Ig_2
FG-GAP
FG-GAP_3
FG-GAP_2
Collectrin
Motif
Other DBs
NCBI-GeneID:
127163042
NCBI-ProteinID:
XP_050962007
LinkDB
All DBs
Position
3:complement(14996142..15041573)
Genome browser
AA seq
1062 aa
AA seq
DB search
MNVFHRQALSKHTVVLVFVLSAARCCQAFNLDVRFPVVKEGKTAGSLFGLSVALHEQVVK
EKRHLLLVGAPKEKAELGVLANETGDVYACPITADRNDCRRLNLLKSNSDDISDTKDPGV
DGMWLGVSIASQSQPGGRVLACGHRYIRTFESNFRMIGKCYVRGNDLQYDSTDSQWQSNS
EICNPRDDQTNEGMCLAGMSAAITQTEIFLGAPGCFNWQGNTFSVWYNPEDEFDEVRSKV
PDIKRGNIYIGYSLAVTQDVLSKDKDTVVTGAPRDEAIGSVTLGEVIKKGSGTGEVQIKS
SVLGEQVGSYFGSSIAVVDLNNDGWKDLIVGAPFYFDRKKDEGGAVYVYMNQNGSFGRKA
DVVLTGPKGSAFGMAVVAIGDVNQDGFQDFAVGAPYHSTGRGRVSIWMGNKTGISQKPSQ
VIEGKDIPGGGFQTFGYSISGGMDVDTNSYPDIAVGSLDDRVVVLRARPVIHLNNIFAVT
PVVISLEDCDACIEAKVCFSYTFSTGSATSQKSITLQYTVEADQQSSRSPRVRFLDNKDG
KYTGKMSVNPSGDCHSLKLDLVSKTVKDKVAPIVFLLSVSLVEPPPSGGQTLEDLSAFPV
ISQKSALTSKTEIHIQKACGSDNKCESNLQMTAAFTDEQNKPFPTQDGHQVFSYTTDKKK
LKLMVSVSNVPSQDRKGEDAYFAVLNVTIPTSLSFSSINPKNLNVELSPGVPYLLCTLGD
PFKSNQRVEIEITFETTGITIDMLEFQTELQLSTLSNQSDLQPLLRVLMVEYNLQPIFNN
PQPSECRTEFSGKVIGESAMKSTSDIGSPVEFNLTVSLPGKPLGNLGSLEVVFQWPYAVA
NQKWLLYLTEIQMTGTSKPFCVPENNIVNPLKLTVSERKTTRRKRDESSSESEQSEPQAL
PNPRAVQRKPPANLNCDTGSALCQTFTCPLLGMDTSAILTVRARVWNSTMLEDYNGVRVH
VAGSATLSLKTDKPTIKMSNYTREFTVAIEPAEAEELKYEVPLWIIIVSALAGVILLGLI
VILLWKCGFFKRANTRELYEAKAQKAEMKTQPSENDRLTEED
NT seq
3189 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtatttcaccggcaagcactttctaaacacacggttgtcttggtgttcgtgctg
agcgccgctcgctgctgtcaagcgttcaacttggatgtgaggtttccagtcgtcaaagag
ggaaaaacagctggcagtttgtttggactttctgttgcactacacgagcaggtcgtaaaa
gagaaacgacacctacttcttgtaggagcaccgaaagagaaagcagagttgggagtgttg
gccaatgagactggagatgtatatgcctgtccaatcactgcagaccgcaatgactgcaga
agactgaaccttctcaaatcaaattctgacgacatatcagacacaaaggaccctggggtg
gatgggatgtggctaggtgtgtcgatagccagtcagagtcaaccagggggccgtgtactg
gcttgtggccatcgttatatacggacctttgaaagcaactttcggatgattgggaagtgc
tatgttcgcggaaatgatttacagtatgacagcacagactctcaatggcagtcaaacagt
gagatatgtaaccccagagatgatcagactaatgaaggcatgtgtcttgccggaatgtct
gctgccatcactcagacagagattttcttgggtgcacctggatgcttcaactggcaagga
aatacattttcagtctggtataaccctgaagatgagtttgatgaagtgaggagcaaggtt
ccagacattaaaagagggaatatttacattggttactctctagctgtgactcaagatgtg
ttaagcaaagacaaggacacagtggtaacaggagctccaagagatgaagccataggatcg
gtgacgttgggtgaagttattaaaaagggtagtggcactggggaagtccaaataaaaagc
agtgtcttgggggaacaagttggatcctattttggcagcagcattgctgttgttgacctt
aacaatgatggttggaaggatctgattgttggagcccctttctatttcgaccggaaaaaa
gatgaaggcggggcagtgtatgtctatatgaaccagaacgggtcttttggtcgcaaagct
gacgtggtcctcactgggccaaagggctcagcttttggcatggctgttgttgctattggt
gatgttaaccaggatggctttcaggattttgctgttggtgctccatatcatagcacagga
agaggaagagtgtctatatggatgggcaacaaaacgggtatttcccaaaagcctagtcag
gtcattgaaggaaaagacatcccaggtggtggattccaaacatttggctattccatcagt
ggtggcatggatgtggacacaaacagttacccagacatagcagtggggtcattagatgat
cgtgtggtcgtgctaagagcacgtcctgtgattcacctaaacaatatcttcgctgtgaca
ccagtggttatcagcctagaagactgtgatgcctgtattgaagcaaaagtctgtttctcc
tacacattcagcactggcagtgccacatcccagaagagtattactttgcaatatacggtg
gaagccgatcagcaatcgtctcggagccctcgtgttcgtttccttgacaacaaagatggc
aaatacactggcaaaatgtctgttaatccgtctggagattgccattctttgaaactcgat
ctagtgtccaagacggtcaaagacaaggttgctccgatagttttccttctgagcgtgtct
ttggtggagcctcctccctcaggcgggcagacgttggaagacctcagtgcttttcctgtg
atcagccaaaaatccgctctgactagcaaaactgagattcacattcaaaaagcctgtgga
tcagataacaaatgtgagagcaaccttcagatgacggcagcattcacagatgagcagaac
aagccgttccccacgcaggacggccaccaggttttcagctacactactgacaaaaagaag
ctgaagttgatggtgagtgtgtccaatgttccatcgcaggacaggaaaggtgaagacgct
tactttgctgttctaaatgtcaccattcccacctcgctcagcttctccagcataaaccca
aagaacctgaatgttgaattgtctcctggggtgccttatcttctgtgtacactgggggac
cccttcaaaagcaatcagagggtggagattgagatcacctttgaaacgacaggaatcaca
atagacatgctggagtttcagactgagctgcagctctcaacgttgagcaatcagagtgat
ctacagcccctgttgagagtgctgatggtggagtacaacctacagcccatctttaataac
cctcagccctcagagtgtagaacggaattcagtggaaaagtaataggagagtcagccatg
aaaagtaccagtgacattggtagcccagtggaattcaacttgacggtgtctcttcctgga
aaacctctgggaaatctggggtctctggaagtggtttttcagtggccttacgctgtggct
aatcagaagtggctgctttatctgacagagattcagatgacaggaacctccaagccattc
tgtgtccctgaaaataacatcgtaaacccccttaaactcactgtgtcagagcgcaagact
acaaggaggaaaagagacgagtcctcctcagagtctgaacagtctgaaccgcaggccctc
ccgaacccgcgggccgtccagaggaaaccgcctgccaacctgaactgtgacacgggtagt
gccctctgtcagacattcacctgccctttgcttggcatggacacctcggccattctcacg
gtcagagcacgcgtatggaacagcacgatgcttgaggactacaatggtgtaagagtgcat
gtggctggtagtgctacactgagtctaaaaacagacaaaccaaccatcaagatgagcaat
tacacccgtgagtttacagtagctatagaacctgcagaagcagaagagcttaagtatgaa
gtgcctctgtggataatcattgtgtccgcattggcaggagtgattctgctgggtctgatt
gtcattttactgtggaagtgtggtttcttcaagagggccaacaccagagagctttatgag
gccaaggcccagaaagcagaaatgaaaacacagccatctgaaaatgaccgccttacagaa
gaggactga
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integrated database retrieval system