Labeo rohita (rohu): 127163081
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Entry
127163081 CDS
T09007
Name
(RefSeq) heat shock 70 kDa protein-like
KO
K03283
heat shock 70kDa protein 1/6/8
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh03040
Spliceosome
lroh04010
MAPK signaling pathway
lroh04141
Protein processing in endoplasmic reticulum
lroh04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127163081
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
127163081
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
127163081
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
127163081
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lroh01009
]
127163081
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lroh03041
]
127163081
03009 Ribosome biogenesis [BR:
lroh03009
]
127163081
03110 Chaperones and folding catalysts [BR:
lroh03110
]
127163081
04131 Membrane trafficking [BR:
lroh04131
]
127163081
03051 Proteasome [BR:
lroh03051
]
127163081
03029 Mitochondrial biogenesis [BR:
lroh03029
]
127163081
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lroh04147
]
127163081
Protein phosphatases and associated proteins [BR:
lroh01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-5
PP5-interacting proteins
127163081
Spliceosome [BR:
lroh03041
]
Complex B
Other components
Prp19 complex
127163081
Complex C
Prp19-CDC5 complex
127163081
Ribosome biogenesis [BR:
lroh03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
127163081
Chaperones and folding catalysts [BR:
lroh03110
]
Heat shock proteins
HSP70 / DNAK
127163081
Membrane trafficking [BR:
lroh04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
127163081
Autophagy
Chaperone mediated autophagy (CMA)
Chaperones
127163081
Proteasome [BR:
lroh03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
127163081
Mitochondrial biogenesis [BR:
lroh03029
]
Mitochondrial protein import machinery
Endoplasmic reticulum membrane and cytosol
Other ER-memrane and cytosol factors
127163081
Exosome [BR:
lroh04147
]
Exosomal proteins
Proteins found in most exosomes
127163081
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
FGGY_C
FtsA
Hydantoinase_A
Radial_spoke_3
Motif
Other DBs
NCBI-GeneID:
127163081
NCBI-ProteinID:
XP_050962062
LinkDB
All DBs
Position
3:25398688..25401656
Genome browser
AA seq
643 aa
AA seq
DB search
MSAAKGVAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQ
VAMNPNNTVFDAKRLIGRKFDDPVVQSDMKHWSFRVISDGGKPKVQVEYKGETKSFYPEE
ISSMVLVKMKEIAEAYLGQKVTNAVITVPAYFNDSQRQATKDAGVIAGLNVLRIINEPTA
AAIAYGLDKGKASERNVLIFDLGGGTFDVSILTIEDGIFEVKATAGDTHLGGEDFDNRMV
NHFVEEFKRKHKKDISQNKRALRRLRTACERAKRTLSSSSQASIEIDSLYEGIDFYTSIT
RARFEEMCSDLFRGTLDPVEKALRDAKMDKSQINDIVLVGGSTRIPKIQKLLQDFFNGRD
LNKSINPDEAVAYGAAVQAAILMGDTSGNVQDLLLLDVAPLSLGIETAGGVMTALIKRNT
TIPTKQTQTFTTYADNQPGVLIQVYEGERAMTKDNNLLGKFDLTGIPPAPRGVPQIEVTF
DIDANGILNVSAVDKSTGKENKITITNDKGRLSKEEIERMVQEADKYKAEDDLQREKIAA
KNALESYAFNMKSSVEDENLKGKISEDDKKKVIEKCNEAISWLENNQLAEKEEYDHKLKE
LEKICNPIITKLYQGGMPAGGSGAQTHGSSGASAQGPTIEEVD
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atgtctgctgcaaaaggagttgctgttgggattgacctgggcaccacctactcctgcgta
ggtgtgtttcagcatggaaaagtggagatcatcgccaatgaccagggaaacagaacaaca
ccaagttatgttgccttcacagacactgagaggctcattggcgatgcagctaaaaaccag
gtggccatgaatcccaacaacaccgtgtttgatgccaagaggctgatcggcaggaagttt
gatgacccggttgtgcagtctgacatgaagcactggtctttccgagtcatcagtgatgga
ggaaagcctaaggtacaggttgagtacaaaggtgaaaccaaatcattttaccctgaggaa
atctcttccatggtccttgtgaagatgaaggagattgctgaagcttatctggggcagaag
gtgacgaatgcagttatcacagttcctgcctatttcaatgactcccaaagacaagcgact
aaagacgctggagtaatcgctggactgaatgtcctcagaatcatcaacgagcccacagct
gcagccattgcctacggccttgacaaaggcaaagcttcagagcgcaacgtcctgatcttt
gacctgggcggaggcacttttgacgtgtccatcctgaccattgaagatggcatctttgag
gtgaaggccacagctggagacactcatctgggtggtgaagactttgataatcgcatggtg
aatcactttgttgaagaattcaagaggaagcacaagaaggacatcagtcagaacaagagg
gccctgaggaggctgcgtacagcatgtgagcgagccaagagaaccctctcgtccagctct
caggccagcattgagatcgactcactgtacgagggcatcgacttctacacgtccatcacc
agagctcgctttgaagagatgtgctcagacctcttcagaggaacacttgatcctgtggaa
aaagccctgagagatgccaagatggacaagtctcagatcaatgacattgtgttggttggt
ggatcaacaagaattccaaagatccagaagcttctgcaggatttcttcaacggcagagac
ttgaacaagagcatcaatccagatgaggcagtggcttatggtgctgcggtccaagctgcg
atcctaatgggagacacatctggaaatgtccaggacctgctgctcctggatgttgcgcca
ctatccttgggcatcgagacggcaggtggagtcatgacggccctcatcaaacgcaacacc
accatccccaccaaacagacccagaccttcaccacctacgcagacaaccagcccggtgtc
ctgatccaggtctatgagggcgagagggccatgacaaaagacaacaacctgctgggtaaa
tttgacctgacaggaattccacctgcaccacgtggagtcccgcagattgaagtgaccttt
gacatcgatgccaacggaatcctaaacgtgtcagcggtggacaaaagcactggaaaagag
aacaagatcaccatcaccaatgacaagggcagactgagtaaagaggagattgagaggatg
gtgcaagaagcagataagtacaaagcagaagatgatttgcaaagagagaagattgctgcc
aaaaacgccctggagtcttacgccttcaacatgaagagcagtgtggaagatgagaacctg
aaaggcaagatcagcgaggatgacaagaagaaagttattgagaaatgtaacgaggccatc
agctggctagaaaacaaccagctggctgaaaaagaagagtatgatcataagctgaaggag
ctggagaagatctgcaacccaatcatcaccaagctataccagggagggatgccagctgga
ggctctggagctcagacacatggaagctcaggggccagtgctcaggggccaactattgaa
gaggtggattaa
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integrated database retrieval system