Labeo rohita (rohu): 127163100
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Entry
127163100 CDS
T09007
Symbol
dnmt1
Name
(RefSeq) DNA (cytosine-5)-methyltransferase 1 isoform X1
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh00270
Cysteine and methionine metabolism
lroh01100
Metabolic pathways
Module
lroh_M00035
Methionine degradation
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
127163100 (dnmt1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lroh03000
]
127163100 (dnmt1)
03032 DNA replication proteins [BR:
lroh03032
]
127163100 (dnmt1)
03036 Chromosome and associated proteins [BR:
lroh03036
]
127163100 (dnmt1)
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
lroh02048
]
127163100 (dnmt1)
Enzymes [BR:
lroh01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
127163100 (dnmt1)
Transcription factors [BR:
lroh03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
127163100 (dnmt1)
DNA replication proteins [BR:
lroh03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
127163100 (dnmt1)
Chromosome and associated proteins [BR:
lroh03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
127163100 (dnmt1)
Prokaryotic defense system [BR:
lroh02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
127163100 (dnmt1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAH
DNA_methylase
DNMT1-RFD
zf-CXXC
DMAP_binding
Motif
Other DBs
NCBI-GeneID:
127163100
NCBI-ProteinID:
XP_050962100
LinkDB
All DBs
Position
3:complement(7505347..7519353)
Genome browser
AA seq
1508 aa
AA seq
DB search
MPTRTSLSLPEDVKERLQVLDEGGDSLSDEECVKEKLRLLQEFLLADTQDQLKILEDKLK
SSELSTEVYTSEVKAVLKKALGVVKEDEGKEQNGHSNGFSENGSHKDDGEQEGAMDTQED
GEAIKSPSAPKGRGGRRSKADSEPKKSPASTRVTRNSGKQPTILSMFSRVPKRKSDELNG
ETTNGDAEVKPEEDIAEEVHEEKRLKTEDEKPDAENTINGKIKPVSTAKTPPPKCPDCRQ
YLDDSDLKFFQGDPDDALDEPEMLTDERLSLFDANEDGFESYEDLPQHKITNFSVYDKRG
HLCPFDSGLIEKNVELYFSCAVKPIYDDNPCMDGGVPAKKLGPINAWWITGFDGGEKALI
GFTTAFADYILMDPSEEYSPIFALMQEKIYMSKIVVEFLQKNQDATYEDLLNKIETTVPP
AGLNFNRFTEDTLLRHAQFVVEQVESYDEAGDSDEQPIIITPCMRDLIKLAGVTLGKSRQ
LYWRAARRQAIRHPTKIEKDSKGPTKATTTKLVHLIFDTFFSDQIDQNNKDGGGVKRHRC
GVCEVCQAPDCGKCSACKDMIKFGGSGRSKQACQKRRCPNLAVKEAEDDENMDEEEVVPL
KETKKMSQAKKKKQTKNKISWVGDPIKTEGRKEYYMKVRVENEVVEVGDCVSVSPADPSH
PLYLARITALWEDGEKMFHAHWFCRGTDTVLGESSDPLELFLVDECEDMQLSFVHGKVNV
LYKAPSENWFMEGGMDDDIKVIDDDGESFFYQLLYDGECARFESPPKVEPSEDQKYKFCA
SCVRNKEREAQEVPCAHEPLEDEESDSKVFYGMATLKGEQYRVGDSVYLPPEAFNFAVKV
ASPVKRSHRKDDVDEDLYPEYYRKSSDYIKGSNLDAPEPFRVGRIKEIFCSKRSDGKPDR
TEVKLRLYKFYRPENTHKGPKGAYHSDINQLYWSDEEVTANMAEVLGRCQVEYAEDLVES
VQDYSSRGPDRFYFLEAYSARTKSFEDPPNHARSAVHKGKGKGKGKGKGKGKAATQESQD
QEPQEQTIPKLRTLDVFSGCGGLSEGFHQAGISETHWAIEMWDPAAQAFRLNNPGTTVFT
EDCNVLLKLVMSGEKTNSLGQKLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLV
VSYLSYCDYYRPKFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQARQYGVAQ
TRRRAIILAAAPGEKLPRFPEPLHVFAPRACSLSVVVDEKKYVSNVTRGNGGIYRTITVR
DTMSDLPEIRNGAAALEISYNGEPQSWFQRHIRGSQYQPILRDHICKDMSALVAARMRHI
PLAPGSDWRDLPNIEVRLRDGTTTKKLRYTHSDKKNGRSGTGALRGVCSCAEGKPCDPAD
RQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVS
VRECARSQGFPDTYRFFGNILDKHRQVGNAVPPPLSKAIGLEIKKCVQDKIKDNATEPVK
QEKMEICN
NT seq
4527 nt
NT seq
+upstream
nt +downstream
nt
atgcctaccaggacctcattgtctttgccagaggatgtcaaggaacggcttcaggtgctg
gatgaaggtggagacagtttgtcagatgaggagtgtgtaaaggaaaagctcaggttactg
caggagttcctgctcgctgatactcaggaccagctcaaaatccttgaggacaagttaaag
agctccgagctttccactgaggtttacacgtcggaggtgaaggccgtactgaagaaggct
ctgggagtcgttaaggaggatgaaggaaaggaacagaacgggcattcgaacggcttctct
gaaaatgggtctcacaaagacgatggcgagcaggagggagccatggatactcaggaggac
ggagaggctataaagtctcccagtgccccgaagggaaggggcggccgtcgcagtaaagca
gactctgagcccaagaaatctccagccagtaccagggtcacacgtaactctgggaaacag
ccaactatcctttccatgttctctagagtcccaaaacgcaagtctgatgagctgaatgga
gaaaccacaaatggtgacgcagaggtaaagcctgaggaagatatagcagaggaggttcat
gaagagaaacgccttaaaacagaagatgagaagcctgatgctgagaacactattaatggc
aagatcaagcctgtgtctacagccaagacccctccaccgaagtgtcccgactgcaggcag
tatctggatgattcagatctcaagttcttccagggagatcctgatgatgctttggatgaa
ccagagatgttgactgatgagcgtctgtccctctttgatgcaaatgaggatggttttgaa
agctatgaagatctgccccagcacaagattactaacttcagcgtatatgacaagcgtgga
catctgtgtccatttgactctggccttattgagaagaatgtggaactgtactttagttgt
gccgttaaaccaatctatgatgacaacccatgcatggatggtggtgttcctgctaagaag
cttggtcctatcaatgcttggtggatcactggttttgatggtggggagaaggctttaatt
ggcttcaccacagcctttgctgactacatcctaatggaccccagtgaggagtactctccc
atttttgctctgatgcaggagaagatctacatgagcaagattgtggttgaatttctccag
aagaaccaggatgccacatatgaagatctgctgaataaaattgagactactgttccacct
gctgggctcaacttcaaccgtttcactgaggacacactgctgcgccatgcccagtttgtg
gtggagcaggtggagagctacgatgaggctggcgactcagatgagcagcccatcattatc
actccctgtatgagagacttgatcaagctggctggtgttactttgggcaagagcaggcaa
ctgtactggagagcagccagaagacaagcaatccgtcatcccaccaagattgagaaggac
agcaagggcccaactaaagccaccaccactaaactggtccacctgatctttgacaccttt
ttctctgatcagattgaccagaacaataaggatggaggtggtgtgaagagacaccgttgt
ggtgtctgtgaggtgtgtcaagcgccagattgtggcaagtgttcagcctgtaaggatatg
atcaagtttggaggaagtggcagaagtaaacaggcctgtcagaagaggagatgtcccaac
ctggcagtgaaagaagctgaggatgatgagaatatggatgaggaggaagtggtgccactt
aaggagacaaagaaaatgtctcaggcaaaaaagaaaaagcagacgaagaataagatcagc
tgggtgggcgatcccatcaagactgagggaaggaaggagtactacatgaaggtgcgtgtg
gagaatgaggtggtggaggtgggagattgtgtgtctgtcagccctgctgacccgtcacat
cccctctacttggccaggattacagcattgtgggaggatggtgagaagatgtttcacgca
cactggttctgccgtggcactgatactgttcttggagagtcatcggaccctcttgagctc
ttccttgtggatgagtgtgaagatatgcagctgagtttcgtccatggcaaggtcaacgtc
ctctacaaggctccatctgaaaactggttcatggagggaggaatggatgatgacataaaa
gtgattgacgatgatggcgaaagcttcttttatcagctcttgtatgatggtgaatgtgct
cgctttgagtctcctcccaaggtcgaaccatcagaggaccagaagtataagttctgtgcc
agctgcgtaaggaataaggaacgagaggctcaggaagtgccttgtgcccatgaacccctg
gaggacgaggagagtgactctaaagtcttctatggtatggcgaccctgaagggtgagcag
tacagagtaggggacagtgtctatcttcctccggaggcctttaattttgcggtgaaggtt
gcaagcccagtgaagcgttctcacaggaaggatgatgttgatgaagatctttacccagaa
tactacaggaagtcctccgactatatcaagggctcaaacctagatgctccagagcctttc
cgtgttgggcgcatcaaagaaatcttctgcagcaagcgcagcgatggaaagccagacaga
acagaggtcaaactgcgcctctataaattttacaggcctgaaaacactcataaaggacca
aagggtgcctaccattctgacataaaccagctctactggagtgatgaagaggtgaccgca
aacatggcggaggtgctgggccgctgtcaagtggagtatgcagaggacctggtggaaagc
gtgcaggactattcaagcagaggacctgatcgcttctatttcctagaggcatacagtgcc
cggactaagagttttgaggatcctcccaatcatgcccgatcagcagtgcataagggcaag
ggaaaaggaaaggggaaaggtaaaggcaagggtaaagcagccacacaggaatcgcaggat
caggagccgcaagagcaaacgatccccaaactgcgcacactggatgtgttctctggctgt
ggtggactgtcagagggtttccatcaagcaggtatctcggagactcattgggccatagag
atgtgggatcctgctgctcaggcattcaggttgaacaacccaggcaccacggtcttcaca
gaggactgtaacgtcctattgaagctggtgatgtccggagagaagacgaactctcttgga
cagaagctgccgcagaagggtgatgtggagatgctctgcggagggccgccctgccaaggc
ttcagtggaatgaaccgctttaactcgcgcacatactcaaagttcaagaactctctggtt
gtgtcatatctgagctactgtgactactacagacccaaattcttcctgctggaaaacgtg
aggaactttgtgtcattcaagcgctccatggtcctgaagctcacactgcgctgtcttgtt
cgcatgggctaccagtgcacctttggtgtgcttcaggcaagacagtatggggtggcccag
acccgacgcagggcgatcatcctggctgcagccccgggtgaaaagctgcctcgcttccct
gaacccttgcatgtgtttgccccacgggcatgttctctcagtgtggtggttgatgagaag
aaatatgtcagcaatgtcactcgtggaaacggaggcatttatcgcaccatcacagtgcgg
gacacaatgtctgacctcccagagatccgcaacggagccgcagctctggaaatctcctac
aacggcgagccgcagtcctggttccagaggcacattcgtggctctcagtaccagcccatc
ctcagggaccacatctgcaaggacatgagcgccctggtggcggcccgtatgcgccacatt
cctctagctcctggttctgactggagggatctgcctaatattgaggtgcgattgcgggat
ggcaccaccacaaaaaagcttcgctacacccactccgacaaaaagaatggccgcagtggc
accggtgcactaagaggagtgtgttcctgtgctgagggaaaaccatgtgaccctgcagac
aggcagttcaacacactgattccttggtgtctgcctcacacgggtaaccgccacaatcac
tgggctggtctgtatggccgtctggaatgggacgggttcttcagcacaacagttaccaat
cctgagcccatgggcaagcagggacgtgtcctccaccctgagcagcaccgtgtggtgagt
gtcagggaatgtgcacgctcccagggcttcccagacacctaccgctttttcggcaatatc
ttagacaaacaccgacaggttggtaatgctgtgcctccacccctctccaaagccatcggc
ctggaaattaagaagtgtgtgcaggataagattaaggacaatgctacagagcctgtgaag
caggagaagatggagatttgcaactaa
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