Labeo rohita (rohu): 127163131
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Entry
127163131 CDS
T09007
Name
(RefSeq) LOW QUALITY PROTEIN: heat shock 70 kDa protein-like
KO
K03283
heat shock 70kDa protein 1/6/8
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh03040
Spliceosome
lroh04010
MAPK signaling pathway
lroh04141
Protein processing in endoplasmic reticulum
lroh04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127163131
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
127163131
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
127163131
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
127163131
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lroh01009
]
127163131
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lroh03041
]
127163131
03009 Ribosome biogenesis [BR:
lroh03009
]
127163131
03110 Chaperones and folding catalysts [BR:
lroh03110
]
127163131
04131 Membrane trafficking [BR:
lroh04131
]
127163131
03051 Proteasome [BR:
lroh03051
]
127163131
03029 Mitochondrial biogenesis [BR:
lroh03029
]
127163131
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lroh04147
]
127163131
Protein phosphatases and associated proteins [BR:
lroh01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-5
PP5-interacting proteins
127163131
Spliceosome [BR:
lroh03041
]
Complex B
Other components
Prp19 complex
127163131
Complex C
Prp19-CDC5 complex
127163131
Ribosome biogenesis [BR:
lroh03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
127163131
Chaperones and folding catalysts [BR:
lroh03110
]
Heat shock proteins
HSP70 / DNAK
127163131
Membrane trafficking [BR:
lroh04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
127163131
Autophagy
Chaperone mediated autophagy (CMA)
Chaperones
127163131
Proteasome [BR:
lroh03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
127163131
Mitochondrial biogenesis [BR:
lroh03029
]
Mitochondrial protein import machinery
Endoplasmic reticulum membrane and cytosol
Other ER-memrane and cytosol factors
127163131
Exosome [BR:
lroh04147
]
Exosomal proteins
Proteins found in most exosomes
127163131
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
FGGY_C
FtsA
MIF4G
Hydantoinase_A
DUF3813
Motif
Other DBs
NCBI-GeneID:
127163131
NCBI-ProteinID:
XP_050962147
LinkDB
All DBs
Position
3:23834233..23836403
Genome browser
AA seq
643 aa
AA seq
DB search
MSSAKGVAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQ
VAMNPNNTVFDAKRLIGRKFDDPVVQSDMKHWSFQVVSDGGKPKVQVEYKGENKTFYPEE
ISSMVLVKMKEIAEAYLGQKVTXAVITVPAYFNDSQRQATKDAGVIAGLNVLRIINEPTA
AAIAYGLDKGKASERNVLIFDLGGGTFDVSILTIEDGIFEVKATAGDTHLGGEDFDNRMV
NHFVEEFKRKHKKDISQNKRALRRLRTACERAKRTLSSSSQASIEIDSLYEGIDFYTSIT
RARFEELCSDLFRGTLEPVEKALRDAKMDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGRD
LNKSINPDEAVAYGAAVQAAILMGDKSGNVQDLLLLDVAPLSLGIETAGGVMTALIKRNT
TIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTF
DIDANGILNVSAVDKSTGKENKITITNDKGRLSKEDIERMVQEADKYKAEDDQQREKISA
KNALESYAFNMKSSVEDEKLKGKISEDDKKKVIEKCNKVISWLENNQLADKEEFEHHLKE
LEKVCNPIITKLYQGGMPAGGCGAQARGASGASAQGPTIEEVD
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atgtcatctgcaaaaggagttgctattggaattgacctgggcaccacctactcctgtgtg
ggggtgtttcagcatgggaaagtggagatcatcgccaatgaccagggaaacagaacaaca
cccagctatgttgccttcacagacactgagaggctcattggagatgcagctaaaaaccag
gtggccatgaatcccaacaacacagtgtttgatgctaagaggctgatcggcaggaagttt
gatgacccagttgtgcagtctgacatgaagcactggtctttccaagttgtcagtgatggt
ggaaagccaaaagttcaagttgaatacaagggcgaaaacaagacattttatcctgaagag
atttcctctatggtcctggtgaagatgaaggagattgctgaagcttatctggggcagaag
gtgactnntgcagttatcacagttcctgcctatttcaatgactcccagagacaagcgact
aaagacgctggagtaatcgctggactgaatgtcctcagaatcatcaacgagcccacagct
gcagccattgcctacggccttgacaaaggcaaagcttcagagcgcaacgtcctgatcttt
gacctgggcggaggcacctttgatgtgtccatcctgaccattgaagatggcatctttgag
gtgaaggccacagctggagacactcatctgggtggtgaggactttgacaaccgcatggtg
aatcactttgttgaagaattcaagaggaagcacaagaaggacatcagtcagaacaagagg
gccctgaggaggctgcgtacagcatgtgagcgagccaagagaaccctctcgtccagctct
caggccagcattgagatcgactcactgtacgagggcatcgacttctacacgtccatcacc
agagctcgctttgaagaactttgttcagacctcttcagaggaacacttgagcctgtggaa
aaagccttgagagacgccaagatggacaagtctcagattcatgacattgtgttggttggt
ggatcaacaagaattccaaagatccagaagcttctgcaggatttcttcaacggcagagac
ttgaacaagagcatcaatccagatgaggcagtggcttatggtgctgcggttcaagccgcc
atcctcatgggagacaaatctggaaatgtccaggacctgctgctgctggatgtggctcca
ctgtccctgggtattgaaactgcaggtggagtcatgacggccctcatcaaacgcaacacc
accatccccaccaaacagacccagaccttcaccacttactcagacaaccagcctggtgtc
ctgatccaggtctatgagggagagagggccatgacaaaagacaacaacctgctgggtaaa
tttgagctgacaggaatcccacctgcaccacgtggagtcccgcagattgaagtgacattt
gacatcgatgccaacggaatcctgaacgtgtcagcggtggacaaaagcactggaaaagag
aacaagatcaccatcactaatgacaagggcagactgagtaaagaggacattgagaggatg
gtgcaggaagcagacaagtacaaagcagaagatgatcagcaaagagagaagatttctgcc
aaaaatgccctggagtcttacgccttcaacatgaagagcagtgtggaagatgagaaactg
aaaggcaaaatcagtgaggatgacaagaagaaagttattgagaaatgtaacaaggtcatc
agctggctagaaaacaaccagctggctgataaggaggagtttgaacatcacctgaaggag
ctggagaaagtctgcaatccaatcatcactaaactgtaccagggagggatgccagctgga
ggatgtggagctcaggcacgtggagcatcaggggccagtgctcaggggccaactattgaa
gaggtggattaa
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