Labeo rohita (rohu): 127163198
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Entry
127163198 CDS
T09007
Symbol
znf598
Name
(RefSeq) E3 ubiquitin-protein ligase ZNF598
KO
K22381
E3 ubiquitin-protein ligase ZNF598 [EC:
2.3.2.27
]
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lroh04121
]
127163198 (znf598)
Enzymes [BR:
lroh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
127163198 (znf598)
Ubiquitin system [BR:
lroh04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
127163198 (znf598)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAH_ZNF598
zf_C2H2_ZNF598
zf-C2H2_13
zf-C3HC4_3
zf-C2H2
zf-C2H2_4
Zn_ribbon_IFT122
Motif
Other DBs
NCBI-GeneID:
127163198
NCBI-ProteinID:
XP_050962256
LinkDB
All DBs
Position
3:11809173..11821525
Genome browser
AA seq
958 aa
AA seq
DB search
MHCAERLRTQERASPGLTARTVVYKPSKSKRIIPRKIQHTQPVPSINMEFVPKKDTESTC
VLCCQDIDMFAVGKCDHPVCYRCSTKMRVLCEQKYCAVCREQLDKVVFIKKLEPFVALNI
HQYQCEKKYDIYFADGKIYAQFRKILLHECPQCPEPKVFSKFEELEQHMRKQHELFCCKL
CAKHLKIFSYERKWYNRKDLARHRTQGDPDDTSHRGHPLCKFCDDRYLDNDELLKHLRRD
HYFCHFCDADGAQEYYSDYKYLSEHFRESHYLCEEGRCSTEQFTHAFRTEIDYKAHKAAA
HSKNRAEARQNRQIDIQFNYAPRQQRRNDGLMVGGDDYDEVDRFNRQGRPGRGRAHGGPQ
NVRSWRYNREEEDREIAAALRASLASRQEERSHVQERITQKPRKEEKTEPDDMRNNRGTA
KQTNEMQARSVKNNPSLAGQDFPVLGAAAPPAPVQSKIKQNSVSLKEDDFPSLSGSVVSA
PMTPAYTNQPKKHSSFQEEDFPALVSKIKPMKPQSNAASAWSQAGSKPSVVSNKPVVLAT
KTAPTVSSSILSASDPPPSGSVPQPLTASSSRRKKKLTSAETHKAPPKVKCPSSSDDEDP
HTGKTAQEIRTVPTMLDISTLLTVKGGSSQPNPKTNKKKKQATTSSLGSPSHTPESVSKM
AHKENVPETKPPDNGLPSKTNSFINGLSEKPAEALSCTSFPENIPSPLKQPVNDQPPPPK
EEEFPALISRKPPPGFKSAFPLKSTQSATPPPPPPPPPPGLGPVVSKPPPGFTGIPLNSN
VVESSMPAVNRVTPAIGSYLIPENFQQRNMDLIQSIKNFLQNDETKFNEFKNYSGQFRQG
LIPAVQYYKSCQELLGENFNRVFNELLVLLPDTRKQQELLTAHGDFKALEKQQQGSKPKK
NKKKAWQTGTTSNSLELDCQVCPTCKQVLDMKDFNTHKTLHIGDDDFPSLQAISKIIS
NT seq
2877 nt
NT seq
+upstream
nt +downstream
nt
atgcattgcgctgagcgcttacgcacacaggagcgcgcttcacccggcctcactgcccgt
actgtcgtttacaagccctcgaaatccaaacggattataccgagaaaaatccagcacaca
cagccagtgccttctatcaatatggagttcgtccctaagaaagacacggagagcacatgc
gtgctgtgctgccaggacatcgacatgttcgcggtggggaaatgcgatcacccggtgtgt
taccgctgctccacgaagatgcgggtgctgtgcgagcagaagtactgcgccgtctgccgg
gaacagctcgacaaggtggtcttcatcaagaaacttgaaccctttgtcgctctgaacatt
catcaatatcagtgtgagaagaaatatgacatctattttgcagatggaaagatatatgca
cagttcaggaagattttgttgcatgaatgtccgcaatgcccagaaccaaaagtgttctcc
aaatttgaagaattagagcaacatatgcggaaacaacatgaactcttctgctgcaagtta
tgtgcaaagcacctgaagatattctcgtacgagcgaaagtggtacaatcggaaagacctg
gctcgacatcgaacgcaaggggacccggatgatacctcgcatcgtgggcatccgctctgt
aaattctgtgatgatcgatacctggacaacgatgagctattgaagcatctgcggcgagat
cattacttctgccatttttgcgacgcagatggagctcaggagtattacagtgactacaag
tacctcagcgagcacttcagagagagccattatctctgcgaggagggccgctgcagtaca
gagcagttcactcatgctttccgcacggagattgactataaggctcacaaagctgctgcc
cacagcaaaaaccgggccgaggcacggcagaatcgccaaatcgacattcagttcaactat
gcaccaagacagcaacgaagaaatgacggtctgatggttggtggcgatgactatgatgaa
gtggatcgcttcaatagacagggaagaccaggaagaggacgagcccatggaggaccgcag
aatgtcaggagctggagatataatcgagaggaagaagaccgagagatagccgctgctttg
agagcttcgttggccagccgccaggaagagagaagccatgtgcaagagagaatcactcag
aagccacgcaaagaagaaaaaacggagcctgatgacatgagaaacaacagaggcactgcc
aagcagacgaacgaaatgcaagctcgatcagtaaagaataatccctctttggctggtcaa
gacttcccagttttaggggcagctgcacctccagccccagttcaaagcaagatcaaacaa
aattccgtctccctgaaggaagatgactttccaagtttgtctggctcagtagtttccgct
ccaatgacgcctgcatacacaaatcaacccaagaaacattcatccttccaagaggaggac
tttcctgcactagtctccaaaatcaaaccaatgaagccccagtcaaacgcagcatcagcc
tggtctcaagctggaagcaaaccttctgtggtttccaataaacctgtggttctggctacc
aaaacggctcctacggtctcatcatccattctgtctgccagtgatccaccacccagtgga
agtgtgcctcagcctctcactgcctcctcatctcgccgcaaaaagaagctcacctctgct
gaaacccacaaagctccacctaaagtcaaatgtccgtcatcatcagatgacgaggacccc
cacaccggtaaaacggctcaggagatccgcacggtgccaactatgcttgacatctccact
ttgttgacggtaaaaggtggctcatctcagcccaaccccaaaaccaataagaaaaagaag
caagccacaacttcatctcttggttctccgtcacacactcccgagtctgtgtccaaaatg
gctcacaaagagaacgttcctgagacgaagccaccagacaacggtctcccctccaaaaca
aactcatttataaatggactctcagagaagccagcagaagcactgtcctgtacatcattt
cctgaaaatattccttcccctttaaagcagccggtaaacgaccaacctcctccacccaag
gaagaggaatttccagctcttatctccagaaaacctccacctggctttaaaagtgcattt
ccgttgaagagcactcagagtgcgacgcctcctcctcctcctcctcctcctcctcctggc
cttgggcctgttgtcagtaaacctccccccggattcaccggcatcccgctcaacagtaat
gtggtggaatcgtcaatgcctgctgttaacagagttacacctgctattggatcctacctc
atacctgaaaatttccagcagagaaacatggaccttattcagtctattaaaaatttcctt
caaaatgatgaaacaaagttcaatgagttcaaaaactattcaggccaatttagacagggt
ttaatacctgctgtccagtactataaaagctgccaggagctgttgggagagaatttcaac
agggttttcaacgagctgctggttctcctaccagacactcgtaagcaacaggagcttctc
actgcccacggagactttaaagctctggagaaacagcagcaaggctccaagcccaaaaaa
aacaaaaagaaagcctggcagacaggcaccaccagcaacagcctggagctggactgccaa
gtgtgtcccacctgtaaacaggtgctggatatgaaagacttcaacacccataagacccta
cacatcggcgatgatgacttcccctctttacaggccataagcaagattatcagctag
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