Labeo rohita (rohu): 127163211
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Entry
127163211 CDS
T09007
Symbol
slc27a1a
Name
(RefSeq) long-chain fatty acid transport protein 1a
KO
K08745
solute carrier family 27 (fatty acid transporter), member 1/4 [EC:6.2.1.-]
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh03320
PPAR signaling pathway
lroh04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
127163211 (slc27a1a)
09158 Development and regeneration
04382 Cornified envelope formation
127163211 (slc27a1a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
lroh01004
]
127163211 (slc27a1a)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lroh02000
]
127163211 (slc27a1a)
Lipid biosynthesis proteins [BR:
lroh01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
127163211 (slc27a1a)
Transporters [BR:
lroh02000
]
Solute carrier family (SLC)
SLC27: Fatty acid transporter
127163211 (slc27a1a)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
127163211
NCBI-ProteinID:
XP_050962278
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Position
3:6544296..6558547
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AA seq
647 aa
AA seq
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MHYVASGSLSLGSLGLLRLFGASWSWSLAAGLGVYLGTGGWRYLYVAVRTAKRDINGLYV
LLRVKLALWHHIRNRNTIPSIFAKTVAKHPDKPALVYEATGETWTFSQLDQISNAVAHWA
LSQGWTSGDVVALFMESRPLQVALWLGLAKVGVEAALINFNLRLDSLLHCVGVSASRAIV
FGAELADAVSEVSSSLSESMVRFSTGDLRQDQMAALKCHPLDSILASAPRHPPPCTVSRG
FNDRLFYIYTSGTTGLPKAAIVVHSRYYRIAAFGYHSFRMQPDDIIYDCLPLYHSAGNIM
GVGQCLIHGITVVVKKKFSASRFWEDCIKHNCTVVQYIGEICRYLLSQPVRPSERQHRVR
LAVGNGLRPSVWEAFMERFGVKQIGEFYGATECNCSIANMDGKVGACGFNSRILPNVYPI
RLVKVNEETMELVRDKHGLCMPCQPGEPGLLVGKINQEDPLRRFDGYASQDATRKKIAYN
VFKKNDSAYLSGDVLVMDELGYMYFRDRSGDTFRWKGENVSTTEVEGTLSSLLDQTDVAV
FGVNVPGVEGKAGMAAIADSTGNFNCNTFLKEIQQALPPYARPIFLRISPCVDTTGTFKI
QKTRLQREGYDPRLTTDQIYFLNSRAGCYELVTEDLYNAFEEGRISL
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgcactatgtggcgagtggctccctctccttgggttccctgggcctgctccgactgttt
ggggcatcctggtcctggagcctcgcagcaggtttgggtgtttacttaggaacaggaggc
tggcggtacctgtatgtggcggttcggacggctaaaagagacatcaacggtctttacgtg
ctgctgagggttaaactggcactatggcatcatattcgtaaccgaaacaccataccctcc
attttcgccaaaaccgtggctaagcacccagacaagcctgcacttgtgtatgaagccact
ggggaaacgtggactttctcccagttagatcaaatttccaacgctgtggcccactgggca
ctgagccagggctggacctcaggagatgtggtggcgctattcatggagagccggccgctc
caagtggcgctctggctcggcctggccaaagtaggcgtggaagctgcgctcatcaacttc
aacctccgactggattcgctcctgcactgcgtgggtgtgtcggcatcccgagcaatagtt
ttcggagcagagctagcagacgcggtgtctgaagtgagctcctctttgagtgagagtatg
gtgcggttcagcacgggagacctcagacaagaccagatggctgctctgaaatgtcacccc
cttgactccattctggcatctgccccccgacacccaccaccctgtactgtgtccaggggc
ttcaacgatcgtttgttctatatctacacttctggcaccacaggactccctaaagctgct
atagtggtgcacagtcgatattacaggattgctgctttcgggtaccattcttttcgaatg
cagccggacgacatcatctatgactgtttacccctctaccactcagcaggtaatattatg
ggggtgggccaatgtctgattcacggtataactgtggtggttaagaagaagttctctgca
agtcgcttctgggaagactgcatcaaacataactgcactgttgtgcagtacattggcgag
atttgccgttacttgctgtctcagcctgtgcgcccctctgagcgacagcaccgtgtgcgt
ttagccgtgggaaatgggctgcggccgagcgtgtgggaggcttttatggagcgcttcgga
gttaaacagatcggcgagttctatggagccaccgagtgcaactgcagcattgccaatatg
gatggcaaggtcggagcttgtgggtttaacagtcgcatcctgccaaacgtgtaccccatc
cgactagtgaaagtgaacgaggaaactatggaactggttcgagacaagcacggactgtgt
atgccttgccaacctggagagcctgggctgttggtggggaaaattaatcaggaggatcct
ctgcgtcggtttgatgggtatgctagtcaagatgccaccaggaagaagatcgcctacaat
gtattcaagaaaaacgactctgcatatctgtcaggtgatgttttagttatggacgagctt
ggatacatgtacttccgagaccggagtggtgacacgtttcgttggaaaggtgagaacgtg
tccactactgaggtggagggaactctaagcagcctgttggatcaaactgatgtagcagtg
tttggagtaaacgtaccaggtgtggagggaaaggctggaatggctgccattgctgactca
acaggaaactttaactgtaatactttcctgaaagagattcagcaagctcttcctccatat
gcacggccaatatttctacgcatctccccatgtgtagataccacaggaacattcaaaatt
cagaagaccaggttgcagagggaaggatacgatccacgcctcacaactgaccagatctac
tttctgaactccagggcgggctgttacgagcttgtgaccgaggatctgtacaatgctttt
gaagaaggcaggatatccctttga
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