Labeo rohita (rohu): 127163268
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Entry
127163268 CDS
T09007
Symbol
srebf1
Name
(RefSeq) sterol regulatory element-binding protein 1
KO
K07197
sterol regulatory element-binding transcription factor 1
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
127163268 (srebf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lroh03000
]
127163268 (srebf1)
04131 Membrane trafficking [BR:
lroh04131
]
127163268 (srebf1)
Transcription factors [BR:
lroh03000
]
Eukaryotic type
Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
Ubiquitous bHLH-ZIP factors
127163268 (srebf1)
Membrane trafficking [BR:
lroh04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
127163268 (srebf1)
Autophagy
Mitophagy
Other mitophagy associated proteins
127163268 (srebf1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HLH
bHLH_IRO3
ZapB
Motif
Other DBs
NCBI-GeneID:
127163268
NCBI-ProteinID:
XP_050962376
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All DBs
Position
3:32257412..32285126
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AA seq
1139 aa
AA seq
DB search
MNLSFDDPSLDTLDSSLTLHDPSDIDTALLSDIDDMLQLINNQDMEFGGLFDHAPFPVSA
APTQDLSTLTHSSPSSPPPASSTPTNTSSILSSSPHLDALLGPPITRSSSIPDKVFHPPT
FQQSPLAQVTSTPTNPATLQTTQPKAQPAPSPSLHPATPPALSQVAPAGKSPVFGATQQA
LFSSPTPQPQQQQPVVTYSTQNGFTAVTQQSSPQPIPSLPASPQNVQPVAIQTQVQSLSA
SPILTTSSSPPTQTISPQVQQVPVLLQPQFIKADSLLLTTLKPDASMVTTVASPCITSLA
TSTAPVQNTSLQALMSGGTILTTVPLVVDTEKLPINRIAISGKPGGQPHKGEKRTAHNAI
EKRYRSSINDKIVELKDLVAGTEAKLNKSAVLRKAIDYIRYLQQSNQKLKQENLALKMSI
QKNKSLKDLVIMEVDVKPEIPTPPASDVGSPQSSGPFSHHGSDSEPDSPMGEDSKPVVER
AGGMLDRSRMALCAFTLLFLSFNPLASLLCGGWSSSGTTVSGHTGRNMLTVQDAAESWGW
MDWMLPTLLVWLLNGVLVAGVLIRLLVYGEPVTRPHSESSVLFWRHRKQADLDLARGDFA
QASQNLWTCLKALGRPLPTSQLDLTCAVLWSALRLCLQRLWVGRWLASRAGALRSSRPLQ
EDARKSCRDAALVYHRLHQLHMTGKLGGSHLSAIHMALSALNLAECAGDCLPVATLAEIY
VSAALRVKTSLPRLLHFTTRVFLSSARQACLSPSGSVPPAMQWLCHPLGHRFFVDEDWSI
RSTPKESIYSQAGNSVDPLAQVTQAFREHLLEKALYCVAQPRGDKNLTDGDGEYSDSLEY
LQLLTSASDAAGATTQSFAIGSNMATVTGCDPHSKWWSSVAVVIINWLQGDDVAAERLYP
AVEHLPRSLQTAESPLPKACLNTFKAVRSLLAKPENYQLSLSYCEKASGLFRDSLNLGPH
CSTNTLDKLVQLLLCDLLLVTRTNVWREQQVASQQSSPTAASPAELQGFQQDLSSLRKLA
QSFRPAMRRLFLHEATARLMAGASPTRTHQLLDRSLRRRATPGSRTEECEMHPGQREQAE
AVMLACRYLPPSFLSAPGQRVGMLVDAARTLEKLGDKRTLHDCQQMIIKLGSGTTVTST
NT seq
3420 nt
NT seq
+upstream
nt +downstream
nt
atgaatctgtcttttgacgacccgtcactggacaccctggactccagtttgactttacat
gatccgagtgatattgacacggctctgctcagtgacattgatgatatgctccagcttatc
aacaaccaggacatggagtttggagggctgttcgatcacgctccatttcctgtctccgca
gcccccacgcaggacctctcaaccctgacccactccagcccttcctctcctccacccgcc
tcttctacgcccaccaacacctcctccatcctcagcagcagccctcacctggacgctctg
ctgggcccccccattacccgcagttcctccatcccagacaaagtgttccaccctcccact
ttccagcagtctcctctggcacaggtgacctccacccccacaaaccccgccacactacag
accacgcagcccaaagctcagcctgctccgtctcccagtctccatcctgccaccccaccg
gctctgagccaagttgccccggccgggaaaagccctgtgtttggtgctacccagcaggcc
ctcttcagctcgccgacaccccaaccacagcagcagcagcctgtggtcacttactccacc
cagaacggctttactgctgtaactcagcagagctctcctcagccaatcccgagtctccct
gcctctccacagaatgttcagccagtggccatccaaacccaggtgcagagtctgtcggct
tcaccaatcttgaccacctcctccagccctcccacacagaccatctcccctcaggttcag
caggttcctgttttgttgcagccacagtttattaaggcagactctctattgctcacaact
ctgaaacccgatgcatctatggtaacgacggtagcatcaccctgcatcacatcgctggct
acatccacagcgccagtccaaaacacctcactgcaggcactgatgagtggaggcaccatc
ctgaccaccgttccgttggtggtggacacagagaagctgcccatcaatcgcatcgccatc
agcggaaaaccaggcggccagccgcacaagggtgagaaacgcacggcccataacgccatt
gaaaaacgctaccgctcctccatcaacgacaagattgttgaactcaaagacctagtggct
gggacagaagctaagctcaataagtcggccgtgttgaggaaagccattgactacattcgc
taccttcagcagtccaaccaaaaactgaagcaagagaacctggcactcaaaatgtccatt
cagaagaacaagtctctaaaggaccttgtgattatggaagtggacgtgaaaccagaaatc
cccacccctccagcatcagacgtcggctcgcctcaatccagcggccctttctcccaccac
ggcagcgactcggagccggacagcccgatgggagaagacagcaagcctgtggttgagagg
gctggtggaatgctggaccgctctcgcatggctctgtgtgccttcactctgctcttcctg
tcctttaacccgctggcatccctgctgtgtggcggctggagcagctctgggacgacagtg
tctggacacacaggaaggaatatgcttacggtgcaggatgcagccgagtcttggggttgg
atggattggatgttgcccactcttctggtgtggctgttgaatggcgttctggtcgctgga
gttttgatccgcttgctcgtgtatggagaacccgtgaccagacctcactcagaatcatct
gtcctcttctggagacaccgcaagcaggccgatctggatctagccaggggagactttgct
caggcttctcagaacctctggacgtgtctcaaagctcttggtcgccctctgcccacgtct
cagctggacctgacctgtgcggtgctgtggtctgccctgcgtctgtgtctgcagagactg
tgggtgggccgctggctagccagccgtgctggagctctccgctccagccgccccctgcag
gaagatgcccgcaagagctgccgtgatgccgccttggtctaccaccgtctacaccagctc
cacatgaccggtaaactcggaggaagccacctctctgcgatccacatggcactgagcgct
ctcaacctggccgagtgtgcaggagactgtcttcctgttgccacactggcagaaatctat
gtgtctgcagccctacgggttaaaaccagcctgccacgcctgcttcacttcaccactcgg
gtgttcttgagcagcgctcggcaggcctgtctctcgcccagcggcagcgtccctcctgcc
atgcagtggctgtgtcaccctctaggtcaccgtttctttgtggatgaggactggtccata
cgcagcacccctaaagagagcatctacagccaggctgggaactcagttgacccgctggct
caggtgacccaggcgttccgcgagcatctgttggaaaaggctctgtactgcgttgcacag
ccacgaggcgacaagaacctcactgatggagatggtgaatactcggactctctggaatac
ctgcagttactcaccagcgcctcagatgcagccggagccacgacacagtccttcgctatc
ggatcaaacatggccactgttacaggatgtgaccctcactccaaatggtggtcgtcagtt
gccgtggtgatcattaattggctccagggagacgacgtggcggcggagagattgtacccg
gcggtggaacacttgccacgcagccttcagaccgctgagagtccgctacccaaagcctgt
ctgaacactttcaaagcggtgcgctcccttctggccaaaccagagaactaccagctcagc
ctcagctactgtgagaaagccagcggcctgttcagagacagcctcaacctcggcccacac
tgcagcaccaacacgctagacaagctggtgcagttgctgctgtgtgatctgttgttggtg
acgcgcacgaacgtgtggcgggagcagcaggtggcgtctcagcaaagctccccgacggcc
gcctcacctgcagagctgcagggcttccagcaggacctcagctccctacgcaaactcgca
cagagcttcagaccggccatgcgcaggttgttcctgcatgaagccacagctcggctgatg
gcgggagccagtccaacacgcacacaccagctcttggaccgcagtctgcgccgccgagcc
acgcctggaagcagaacagaggagtgcgagatgcatccaggccagcgggagcaggcagag
gccgtgatgctggcgtgccgctacctgcccccttccttcctgtcagctccgggtcagagg
gtgggcatgctggtggacgccgcccggacgctggagaaactaggcgacaaacgcaccctc
cacgactgccaacagatgatcatcaaactaggcagcggaacgaccgtcacgtccacctag
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