Labeo rohita (rohu): 127163295
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Entry
127163295 CDS
T09007
Symbol
tbc1d16
Name
(RefSeq) TBC1 domain family member 16
KO
K24797
TBC1 domain family member 16
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lroh04131
]
127163295 (tbc1d16)
Membrane trafficking [BR:
lroh04131
]
Protein recycling
Rab GTPases and associated proteins
Rab4 associated proteins
127163295 (tbc1d16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
PH_RBD
Motif
Other DBs
NCBI-GeneID:
127163295
NCBI-ProteinID:
XP_050962417
LinkDB
All DBs
Position
3:31402596..31438691
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AA seq
717 aa
AA seq
DB search
MSFGRLLRRASSKASDLLTFNVGTGGSRTVLDGEIIFSKNNVCVHPAEPLPGLPEHHPGY
LCVHLEKDETLGSTLILTWVPNSRIQRQDEEALRYITPESSPVRRNPRRRAHRSHSRPPP
APEEEEDEEGPEPALQNQQLLEEGDEGSCELSADEVSRDSTLGSDSDTFSSPFCLSPVSE
ALGESSSSVFLDNESRECDEPMAHSASSASSLDSHAPSESSQSQGVRWEEQQKVMALEHL
CGVFRVDLGHMRSLRLFFSDEACTCGQLVIASRESQYKILHFHHAGLDKLAEVFQQWKCC
RETQLKDQVSDEKSCMQFSIRRPTLPSAEMHPEERLYRRLDVSSWLRHLNNNGQVVEEYK
LRKAIFFGGIDPSIRGEVWPFLLHYYNYDSTSEEREAWRLQKRVEYQEVQQRRLSMSPEE
HSEFWRKVQFTVDKDVVRTDRSNMFFRGENNPNVEIMRRILLNYAVFNSDMGYCQGMSDL
VAPLLTEIQDESDTFWCFVGLMENTIFISSPRDEDMERQLMYLRELLRLMLPRFHQHLTR
LGEDGLQLLFCHRWVLLCFKREFPDAEALRMWEACWAHYQTDYFHLFLCVAIIVLYGDDV
TEQQLATDQMLLHFSNLSMHMNGELVLRKARSLLYQFRLLPRIPCSLHDLCKLCGPGMWD
SRYIPTIECSGEHPDSQSCPYGGTATPESPPLPSPNQPNEGKRGSKTRDIFTFRKHS
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgtcattcggtcgactcctacgacgtgcatcctccaaagcctctgaccttttgacgttt
aacgtgggcacgggaggatcaaggaccgtgctggatggagagatcatcttctccaagaac
aatgtgtgtgtgcacccggccgagcccctgcccggactgcctgaacatcacccaggttat
ctttgtgtgcacttggagaaagacgagaccctcggctccaccctcatcctcacctgggtg
cccaactctcgcattcagcggcaggacgaggaggcgctccgttacatcacgcccgaaagc
tcacccgtccgccgcaacccccgccgccgagcccatcggagccactctcgcccgccgccc
gcccccgaagaagaggaggatgaagaggggccagagccggccctgcaaaaccagcagctt
ttggaagagggcgatgaaggctcctgtgagctttcagcggacgaggtgagtcgggacagt
accctcggctcagactcggacaccttctcctcgcccttctgcctgtcgccggtcagcgag
gctctgggtgagagcagcagctccgtcttcctggacaatgagagcagggaatgtgatgaa
cctatggctcactctgcaagctccgcctccagtctggacagccacgccccctccgaaagc
agccaatcacagggagttcggtgggaggagcagcagaaagtcatggcattagagcaccta
tgtggggtgttcagagttgacctgggtcacatgaggtcactgcggctcttcttcagcgat
gaggcctgcacctgtggacagctggtcatcgccagcagagagagccagtacaagatcctt
cacttccaccatgcggggctggataaactggccgaggtgtttcagcagtggaaatgctgc
agggagacccagctcaaagaccaggtgtcggatgagaagtcatgtatgcagttttccatc
cgtagacccacgttaccatctgctgagatgcacccagaggagcgtctgtatcggcggctg
gatgtcagctcttggctccggcatctcaacaacaacggacaagtggtggaggagtacaag
ctcaggaaggcgatcttcttcgggggcattgacccatccatccgtggtgaagtgtggccc
ttcctgctgcactactacaactacgactccacatctgaggagcgtgaagcctggagattg
cagaagcgtgtggagtaccaggaggtccagcagaggaggttgtcgatgagtccagaggag
cacagtgagttctggaggaaggtccagttcactgttgataaagatgttgtcagaactgac
cgaagcaacatgttctttagaggagagaacaaccccaatgtagaaatcatgagacgtatc
ctgttgaactacgccgtgtttaactcagacatgggctactgtcagggcatgtcggacctg
gtggctcctctactgaccgagatccaggatgagagcgacacgttctggtgctttgtgggt
ctcatggagaacaccatcttcatcagctcccctagagatgaggatatggagaggcagctg
atgtacctgagggagctcctgcggctgatgctgcctcgtttccaccagcatctgacccgg
ttgggtgaggacggccttcagctgctgttttgccaccgctgggttcttttgtgtttcaag
cgcgagtttcctgatgccgaagccctgcgcatgtgggaggcctgctgggcacattatcag
acggactacttccacctgttcctgtgtgtcgccatcatcgtgctgtacggcgatgatgtc
acagaacagcagctcgctacagatcaaatgctgctgcactttagtaacctctccatgcac
atgaatggagagctggtgctgaggaaggcacgtagcctgctctatcagttccgccttctt
cccagaattccctgcagcttacacgacctgtgtaaactgtgcgggcccggaatgtgggat
agccgttacatccccaccatagaatgttccggagagcatcccgactctcagagctgcccc
tatggaggcaccgccaccccagagagcccacccttacccagccctaaccagcccaacgag
ggcaagaggggctccaagacacgagacattttcactttccgcaagcactcctga
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