Labeo rohita (rohu): 127163339
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Entry
127163339 CDS
T09007
Symbol
nr5a5
Name
(RefSeq) nuclear receptor subfamily 5, group A, member 5
KO
K08027
nuclear receptor subfamily 5 group A member 2
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lroh03000
]
127163339 (nr5a5)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
lroh03310
]
127163339 (nr5a5)
Transcription factors [BR:
lroh03000
]
Eukaryotic type
Zinc finger
Cys4 Fushi tarazu-F1-like
127163339 (nr5a5)
Nuclear receptors [BR:
lroh03310
]
5. Fushi tarazu-F1 like
5A. Fushi tarazu-F1 like receptor
127163339 (nr5a5)
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Motif
Pfam:
Hormone_recep
zf-C4
DUF7560
RseA_C
Spectrin_SYNE1_2
Motif
Other DBs
NCBI-GeneID:
127163339
NCBI-ProteinID:
XP_050962479
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Position
3:complement(6954363..6961297)
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AA seq
541 aa
AA seq
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MNISNYPLDHPQSTALHSGDYIQDLASQEGPSTSQEFKPDPDSRATQEEGCPVCGDRVSG
YHYGLLTCESCKGFFKRSVQNNKRYTCADAQCCPMDPAQRKRCPYCRFQKCLAVGMKKEA
VRADRMRGGRNKFGPLYRRDRQMKQQRGSYHQTNTAPYRVKIEGPQALVPAAPHDFHVLN
PSSASLDSDHYHPPQTFHPSMSQSEFPMLLDCTIPKDRTLPDPSLPFHTMCYPGFHGYPP
EKRELPFSYSPASVTPPAPISPTVLSTPAPTPTATLTPTSTPSSTPTPAQNLTPSSTPVS
SSCFLNELLQAEPDEKQLCTRVLASLQREQACRGKHDRLNTFSIMCKMADQTLFGLVEWA
RNSALFKELKVEDQMGLLQSCWSELLVLDHLCRQVAYGRDGSICLITGQQIEVSTILSQA
GATLSSLVSRAQDLVSKLRSLQLDREEFVCLKYLVLFNPDVKSVQDRRQVEQTQERVNRA
LMDHTMQTHPGHSDKFGQLLLRLPEVRSISLQVEEYLYQRHLLGDLPCNSLLTEMLHAKH
T
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgaacatctcaaactatcccctggatcacccccagtccacggccctccactctggcgat
tacatacaggaccttgcgtcacaagagggaccgtcaacatctcaggagttcaagccagac
ccagacagtagggcaactcaagaagagggctgtcctgtgtgtggtgacagggtgtcagga
tatcactatggtctactcacctgtgagagctgtaagggcttttttaagcgctctgtacag
aataacaagcgctatacgtgtgcagacgcgcaatgctgccccatggacccagcccagagg
aaacggtgtccttattgccgctttcagaaatgtctagctgttggcatgaagaaagaagct
gtacgtgcagacagaatgaggggtggacgaaacaagtttggacctctataccgacgggac
aggcaaatgaaacagcaaagagggtcctatcaccagacgaacactgccccctacagagtc
aaaattgagggaccacaagcactggtacctgctgcgcctcacgattttcatgttctcaac
ccctcctctgcttctcttgactctgatcattaccacccacctcagacctttcatcctagt
atgagccagtctgagtttcccatgctgttggactgcaccatacccaaagaccggacacta
cctgatccatctctccctttccacacaatgtgctatccaggcttccacggataccctccc
gagaaaagagagctcccatttagctacagccctgcttctgtgacaccccctgctccaatc
tctcctactgttctctccacacctgcacctacacccactgctacactcacgccaacctca
actccaagttctaccccaactccagcacagaacttgacacccagttcaacaccagtctct
agttcatgcttcctaaatgaactcctacaagctgagccagatgagaagcagctttgtaca
cgggtattagcaagcctccaaagagaacaggcctgccgaggaaaacatgaccgtctcaac
accttcagcatcatgtgcaaaatggctgaccagactttattcggactggtggagtgggca
agaaacagcgcactgtttaaggagcttaaggtggaggatcaaatggggttactgcagagc
tgctggagtgagcttcttgtcctggatcacttatgcaggcaggtggcttatgggagagat
ggcagcatctgtctaattactgggcaacagattgaagtatcgaccattctcagtcaggct
ggagcaactctcagtagtctggtgtcccgagcccaggatcttgtctccaagcttaggtca
ctacaactagacagagaggagtttgtgtgtctcaaatatctggttctcttcaatccagat
gttaaatcagtacaagaccgaaggcaggtagaacaaactcaagagcgtgtaaacagagct
ttgatggaccacacaatgcaaacccatccaggtcactctgacaagtttggacagctgctg
ctccgtctgccagaggtgcgcagcatcagtctgcaggtggaggaatacctgtatcagcgc
cacctgctgggagatctaccttgcaactcactgctgactgaaatgcttcatgccaagcac
acatga
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