Labeo rohita (rohu): 127163361
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Entry
127163361 CDS
T09007
Symbol
itgb3a
Name
(RefSeq) integrin beta-3a
KO
K06493
integrin beta 3
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh03266
Virion - Herpesvirus
lroh04081
Hormone signaling
lroh04145
Phagosome
lroh04148
Efferocytosis
lroh04510
Focal adhesion
lroh04512
ECM-receptor interaction
lroh04517
IgSF CAM signaling
lroh04518
Integrin signaling
lroh04810
Regulation of actin cytoskeleton
lroh04820
Cytoskeleton in muscle cells
lroh05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
127163361 (itgb3a)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
127163361 (itgb3a)
04512 ECM-receptor interaction
127163361 (itgb3a)
04517 IgSF CAM signaling
127163361 (itgb3a)
04518 Integrin signaling
127163361 (itgb3a)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
127163361 (itgb3a)
04148 Efferocytosis
127163361 (itgb3a)
09144 Cellular community - eukaryotes
04510 Focal adhesion
127163361 (itgb3a)
09142 Cell motility
04820 Cytoskeleton in muscle cells
127163361 (itgb3a)
04810 Regulation of actin cytoskeleton
127163361 (itgb3a)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
127163361 (itgb3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lroh04131
]
127163361 (itgb3a)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lroh04147
]
127163361 (itgb3a)
04515 Cell adhesion molecules [BR:
lroh04515
]
127163361 (itgb3a)
04090 CD molecules [BR:
lroh04090
]
127163361 (itgb3a)
Membrane trafficking [BR:
lroh04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
127163361 (itgb3a)
Exosome [BR:
lroh04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
127163361 (itgb3a)
Cell adhesion molecules [BR:
lroh04515
]
Integrins
Integrin beta subunits
127163361 (itgb3a)
CD molecules [BR:
lroh04090
]
Proteins
127163361 (itgb3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_beta
Integrin_b_cyt
Integrin_B_tail
EGF_integrin
PSI_integrin
I-EGF_1
EGF_2
EGF_TEN
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
127163361
NCBI-ProteinID:
XP_050962516
LinkDB
All DBs
Position
3:25528954..25545001
Genome browser
AA seq
783 aa
AA seq
DB search
MGVNLIEVWVPVLLLVSIAAGSNICTSRGVSTCKECLSIHPTCAWCSQETFGKEGSSLSR
CDLRDSLIQSGCDVKSIEFPVSKMTILENVPLSDKAGGSDDITQIQPQKIHLTLRPDDSR
KFTVTVKQVADYPVDLYYLMDMTNTMKDDLQKLYALGNDLAKALRGVTSNLRMGFGAFVD
KPLSPYMYIYPEEIIQNPCYKFPEPCPPQFGYRNVLSLTEQVERFTEEVKKQKVSRNRDA
PEGGFDAIMQAVVCKDKIGWRPDASHLLIFTSDDRSHLALDARLAGIVQPHDGGCHINSN
NEYDKSTILDYPSLGMITDKLSENNINLIFAVTSHVVPLYRNYSELIPGSAVGTLSRDSG
NVVQLILDAYAKIRSKVELELLGVPDELSLFINATCLDGQVTAGVRSCSGLKIGDMVSFS
IEAKLHGCPKEKSRTFMVKPVGFKDTLHVTVDFACECDCQQSSTPTSASCHYGNGTLECG
VCLCDQGRLGSRCECSEGEYNPTQQDRCSPDPATPICNGRGDCVCGQCTCRSTDFGKVWG
PYCECDDFSCLRSKGQICSGNGECNCGTCQCSAGWSGESCDCSTRTDACIVSGGMLCSGR
GHCVCGVCECTQQGAYGSTCEKCPTCPDACTIKKECVECKHYKRGDLYEKNCNHVCRDEI
VPVDELVFHETNSVNCSYKDEDDCVQNFQYYEDASGKSFLYLVKEPDCPKGADVLVVTLS
VVGAILLLGLAALLVWKLLITIHDRHEFAKFEEEKARAKWEAANNPLYKGATSTFQNVTY
RGS
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atgggagtgaatctgatagaagtttgggtgccagttttacttctagtttccatagctgcg
ggctctaacatttgcacttccagaggagtgagtacctgtaaagaatgcttgtccatacat
ccaacttgtgcctggtgctctcaggagacctttggaaaggaagggtcgagtttgtcccgg
tgtgatctcagagacagtctcattcagtctggttgtgatgtgaagtctattgaatttcca
gttagcaaaatgacaatactagagaacgtacccctgagtgacaaagcagggggttcagat
gacatcactcagatccagccacaaaaaatccacctgaccctcaggccagacgattcaagg
aaatttaccgtcactgtgaagcaagtagctgattacccagttgacctgtactacctgatg
gacatgaccaataccatgaaggacgacctgcagaagctttacgcgctgggcaatgatctg
gccaaagctttacggggcgtcaccagtaatctgcgcatgggatttggagcttttgtagac
aaaccgctctcaccctacatgtacatttaccctgaagaaatcatccagaatccttgttat
aagtttcctgaaccctgtccaccgcaattcggctatcgcaacgtattgtctctgacggag
caggtagagaggttcacagaggaagtgaagaaacagaaagtgtccagaaacagagatgcc
cctgagggtggatttgatgctatcatgcaagcagtagtatgcaaggacaaaattggatgg
aggcctgatgcatctcatttgctgatcttcacaagtgatgacagaagtcatttggcttta
gatgccaggctggctggaatcgtccagccccatgatggagggtgccatatcaacagcaac
aatgaatatgacaagtccactatactggactatccttcacttggtatgatcacagacaaa
ttatccgagaataacatcaacctcatctttgctgtaaccagccatgtggtgccactatat
cgtaactacagcgagctgattcctggctctgcggtcggaacactctctagagactctgga
aatgttgtgcaactcattttggatgcatatgcgaagatcaggtctaaggttgagctggaa
ctgctgggtgtgccggatgagttatcgctgttcatcaatgcaacatgcctggatggacag
gtcacagcaggcgtccggtcctgcagtggactcaaaattggagatatggtttcatttagc
attgaggcgaaacttcacggctgccccaaagagaagagccggaccttcatggtgaagcca
gtcggctttaaagacacccttcatgtgactgtggactttgcttgtgaatgtgactgtcag
cagtcctccacgcccaccagcgcttcctgccactacggcaacggtaccctggagtgcggc
gtgtgcctgtgcgaccagggccgtctgggctctcgatgcgagtgctcagagggcgaatac
aatcccacccaacaagacagatgcagccctgacccagcgacgccgatttgtaacgggcgt
ggagactgtgtgtgcggacagtgtacctgtcgctcgactgattttgggaaggtttggggg
ccgtactgtgaatgtgatgactttagctgcctccgttccaaaggacaaatatgttcaggt
aatggtgagtgcaactgtgggacctgtcagtgtagcgccggatggtctggcgagagctgt
gactgttcgacccgcacagacgcctgcatagtgagtggaggaatgctgtgtagtgggcgt
ggccactgtgtgtgtggtgtctgtgagtgcacacagcaaggagcctatggatcaacctgt
gagaagtgccccacctgcccagatgcctgcaccatcaaaaaggagtgtgttgagtgtaaa
cattataaaagaggggatctgtatgagaagaactgcaatcacgtctgcagagatgagatt
gtgccggtggatgagctggtctttcatgagacgaactcagtgaactgcagctacaaggat
gaggacgactgcgttcagaacttccagtattatgaagatgccagtggaaaatcctttctc
tatcttgttaaagaaccagactgtcctaagggtgctgatgtcttggtggtcactctttcg
gtcgttggtgcgatcctgctgctgggactggctgcactcttggtgtggaagcttctgatc
accattcacgaccgtcatgaatttgccaagtttgaagaggagaaagccagggctaagtgg
gaggcggctaataatccactctacaaaggagccaccagcaccttccaaaacgtaacatat
cgtggcagttaa
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