Labeo rohita (rohu): 127163518
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Entry
127163518 CDS
T09007
Symbol
ntn1b
Name
(RefSeq) netrin-1b
KO
K06843
netrin 1
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
lroh00536
]
127163518 (ntn1b)
Glycosaminoglycan binding proteins [BR:
lroh00536
]
Heparan sulfate / Heparin
Axon guidance molecules
127163518 (ntn1b)
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Gene cluster
GFIT
Motif
Pfam:
Laminin_N
NTR
EGF_laminin
EGF_LMN_ATRN
BNR_6
Thioredoxin_8
Motif
Other DBs
NCBI-GeneID:
127163518
NCBI-ProteinID:
XP_050962726
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All DBs
Position
3:complement(30548085..30614965)
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AA seq
601 aa
AA seq
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MIRILVTCVSMVSIIAMVAGARGGYGMSMFAAQSSPPDPCYDENGNPRRCIPDFVNSAFG
KDVRVSSTCGTPASRYCVVTEKGEERSRDCNICDATDPKKSHPPAYLTDLNNPHNLTCWQ
SENYVQYPQNVTLTLSLGKKFEVTYVSLQFCSPRPESMAIFKSMDYGKTWVPFQFYSTQC
KKMYNKPSKAAITKQNEQEAICTDSHTDMQPLTGGLIAFSTLDGRPSAHDFDNSPVLQDW
VTATDIKVTFNRLHTFGDENEDDSELARDSYFYAVSDLQVGGRCKCNGHASKCVKDREGN
LVCECKHNTAGPECDRCKPFHYDRPWQRATAREANECVACHCNLHARRCRFNMELYKLSG
RRSGGVCLNCRHNTAGRHCHYCKEGYYRDMTKAISHRRACKACDCHPVGAAGKTCNQTTG
QCPCKDGVTGITCNRCAKGYQQSRSPIAPCIKIPAAAPTATYSSSEEPTDCDSHCKTPKG
KMKVTMKKYCKKDFAVQVHVLKGDKAGEWWKYTINIISVYKQGGHRIRRGDQLLWIRAKD
VACKCPKIKPGRKYLLMGSDDDDSRGQSGVVADKGSLLIPWKDLWARRLRKFQQRDKRGK
C
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgataaggattttggtaacgtgcgtctccatggtgtccatcatcgcgatggtggccggt
gctcgtggtggatacggaatgagtatgttcgcggctcaatcctctcctccggacccgtgt
tacgacgaaaacggcaaccccagacggtgcatccccgattttgtgaactccgcgttcgga
aaggacgtgcgcgtctccagcacctgcggcactccggcgtcgcggtactgcgtggtgacc
gagaagggcgaggaaagatcgagggactgcaacatctgcgacgccacggaccccaagaag
tcgcatccacccgcgtacctaacagacctcaacaaccctcacaacctcacctgctggcag
tcggagaactacgtgcaatacccgcagaatgtgactctgacgctgtctctggggaagaag
ttcgaggtgacttacgtgagcctccagttctgctctcctcgccctgaatccatggccatc
tttaagtccatggattacgggaaaacctgggtgccgtttcagttctactcaacccagtgc
aagaaaatgtacaacaaaccgagcaaagctgcgatcaccaagcagaacgagcaggaagcg
atctgcacggactcgcatacggacatgcagccgttaacaggtgggctcatcgcgttcagc
acgctggatggcagaccctccgcgcacgactttgacaactctcccgtcctgcaggactgg
gtcacggccaccgatatcaaagtgacctttaaccggctgcacacgttcggcgatgagaac
gaggatgactcggaactcgccagggactcgtatttttacgccgtgtctgacctgcaggtc
ggcggtcgctgtaagtgtaacgggcacgcgtcaaaatgcgtaaaggaccgagaagggaac
ctagtgtgcgagtgcaagcacaacacggcgggaccggagtgtgacaggtgtaagcccttt
cactacgaccggccgtggcaacgcgcgacggccagagaggcgaacgaatgtgtcgcctgt
cactgtaacttacacgcccgccgctgccgcttcaacatggagctgtataagctatcgggc
cgcaggagtggaggagtctgtctcaactgcagacacaacacagccggacgccactgccac
tactgtaaagagggctactacagagacatgaccaaggccatctcacacagacgcgcctgc
aaagcttgtgattgtcatccggttggtgcagctggtaagacctgtaaccagacgaccgga
cagtgcccatgtaaagatggtgtgactgggatcacctgcaaccgctgcgctaaaggatac
cagcaaagcagatcacctatcgccccctgtatcaagattcctgctgctgcacccacagcc
acctacagcagttcagaagagcccacagactgtgactcccattgtaagactcctaagggc
aagatgaaggtcaccatgaaaaaatactgcaaaaaagacttcgctgtccaggttcacgtg
ctaaaaggagataaagcgggcgaatggtggaaatacactatcaacatcatttccgtctat
aagcagggcggacatcgcattcgccgaggagaccagctcctttggatccgcgctaaagac
gtggcctgcaagtgccccaaaattaaacccgggaggaagtacctgctgatgggctctgat
gacgacgactcccgcggtcagagcggcgtggtggcggacaagggcagcctgctcatcccg
tggaaggacctgtgggcccgtcggctcaggaaattccagcagcgtgacaagaggggcaag
tgctag
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