Labeo rohita (rohu): 127163628
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Entry
127163628 CDS
T09007
Symbol
rapgef2a
Name
(RefSeq) rap guanine nucleotide exchange factor 2 isoform X1
KO
K08018
Rap guanine nucleotide exchange factor 2
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04010
MAPK signaling pathway
lroh04517
IgSF CAM signaling
lroh04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
127163628 (rapgef2a)
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
127163628 (rapgef2a)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
127163628 (rapgef2a)
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Ortholog
Paralog
GFIT
Motif
Pfam:
RasGEF
RasGEF_N
RA
PDZ
PDZ_6
cNMP_binding
RA_2
PDZ_2
Motif
Other DBs
NCBI-GeneID:
127163628
NCBI-ProteinID:
XP_050962875
LinkDB
All DBs
Position
1:35617333..35661180
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AA seq
1478 aa
AA seq
DB search
MASYVDNSFRHAIMKNPADRTQQDLQIVYSYLHGMEALSNLREHQLRLMCETVRYEQHEA
NEVLYYPDDIGTCWYILLSGSVFIKESMFLPRSSFGKRSAGSLRRGCECIVLEASEMIVV
DYMDDNDEYFQRQASHRQSRRRFRKINQRGERQTIIDTVDHYPVSKPPLPPGYHSECSKS
QLPADFSKLHPSDSCHSHMTSSQSRSSIASDSGSSSLSDIYQATESECGDMDLSGLPETA
VDSDEDDDDEDVGRGTDPLMSRDIVRDCLEKDPMDRTDDDIEQLLEFVQQLPAFASLSVS
VRRELCAVMVFAVVERAGTIVLNHGEELDSWSVILNGAVEVIYPDGSGESVCMGGSFGVS
PSMEKQLMTGVMRTKVDDCQFVCIAQQDYCCILNQVEQNTQRVEEEGEIVMVKEHRELDR
TGTRKGHIVVKGTAERLMQHLVEDHSIVDPTYIEDFLLTYRTFLPSPLILGQRLLDWFND
PSLRDKVTRVVLLWVNNHFSDFEGDPDMTSFLEEFQSNLEREKMTGQLRLLNIACAAKAK
PRVITINRPAREMPLPFTLIGGAERGTRLFISSVEVGSKAEEAGLKRGDQILEVNGQTFE
NVQLSKATEILKNNTQLCMSVKTNLLVFKELVARVAEERKNGVPHLPKIGDGKKNSRYSV
PELGAGSDVIGQEKVSKKVKAHTMGGRNKLMKILDKTRMSILPQKPYSDLGLGQTQDDSI
VGLRQNKQSQPTMAVSGNLSSSNPDLAQGQQRIIDYSTQPPELQDQVLRVFKADQQSRYL
LINRDTTAREAANQAMREFGLTASPEAYSLCEVSVTQEGVIKQRRLPDQLSKLADRIQLS
ARYYLKSNMETETLCSDVEAQEMQRESVVPLLSLSSMEIANQLSARNYLLFSSIEPTDYI
SDLFKLHPQEPPTNLRNFEGLVNQETFWVATEIVQETNLAKRVKIIKHFIKIALHCRDCK
NFNSMFAIISGFNLAPVARLRSTWERLPGKYEKLLAELQDVFDPSRNMAKYRNLLNKHNL
QPPVIPLFPVIKKDLTFLHEGNNSKVDGLVNFEKLRMIAREIRHVVRMASITMDPALLFK
TRKKKWRSLGSLSQVSSSSLSDIGTMGGKRKGRRSSFLSAKKLYEVEMMSRRVRQYLDTH
SHESDEDKLHELSLQCEPASSSTMKNSGDRRRVDVSPVGQRSTTPQQTNGNHGRKKSLSK
DLPPFEEGRDRQRKPPEDSQSNTSSLLSSPRTSPHSTPRKAPQLVVSEASDQLSLLSSSS
SDLIMVDDHTHTQPHMLAHPLSARRAEPDQISLGSYSLTQDQCDRASLDAADSGRGSWTS
CSSGSHDNIQSIPPRVGYYDNRSWETLSEGMGRSHVTTPTGYWADELEGDTGTIKRRGGK
DETPNASKNTPNRRDGRFREPPPTPPGYTALSLAEADSHSHAHGRRPPDYTAALQRSRFL
KRSCDPPPLHPSSRLPAYNHCQSPRRTQPDENEQISAV
NT seq
4437 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcatatgtggacaatagttttcggcatgcgatcatgaagaatcctgccgacagg
acgcaacaggatctgcagatcgtgtactcgtacctccatggcatggaagcactgtccaac
ttgagggaacaccagctcaggttgatgtgtgagacagttcgatatgaacagcatgaagct
aatgaggttttatactatcctgatgacattgggacctgctggtatatcctcctctctggc
tcagtctttataaaggagtctatgtttctgccccgcagcagttttggtaagcgttctgct
ggtagtttgcgtcgtggttgtgagtgtatcgtccttgaggcttcagaaatgattgtggtg
gactatatggatgacaacgatgagtatttccaaagacaagcatctcatcggcagtcaagg
agaagattccgcaaaataaaccagcgtggagagcgacagactataatcgatacggtcgat
cattatccagtcagcaagcctcctctgccaccaggatatcactcggaatgctcaaaatcc
cagcttcctgctgacttctccaagctccacccctctgacagttgccactcccatatgacc
tccagccaatcacgttccagcattgccagcgattcaggaagtagcagcctatcagatatt
taccaggccactgagagtgaatgtggagacatggatctgagtgggcttcctgaaacagcg
gtggactcggacgaggatgatgatgatgaggacgtagggaggggaacggaccctcttatg
agtcgagatatcgtgagagactgtctggagaaagatcctatggaccgtacagatgatgac
atcgaacagttactggagtttgtgcagcagcttccggcatttgccagtctgagtgtttcg
gtgcggagggaactctgtgccgtcatggtgtttgccgtcgtggagcgggccggaaccatc
gtgctcaaccacggtgaagagctggactcatggtcagtcattctgaatggagcagtagag
gtgatctatccagatggcagcggtgagagtgtgtgtatgggtggaagttttggtgtctcc
ccttctatggagaaacagctgatgactggagtcatgaggaccaaagtggacgattgtcag
tttgtgtgtattgcccagcaggactactgctgcattcttaatcaggttgagcaaaacaca
cagcgagtggaagaggaaggagaaatcgtcatggtaaaagaacacagagaactcgaccgg
acaggcacccgcaagggacacattgttgtcaagggtactgctgaaaggctgatgcagcac
ttggtggaggatcattcaattgtcgaccccacatatattgaggacttcctgttgacctat
cgtaccttcctgcctagtcctctgattttaggacagagacttctggactggtttaatgac
cccagtttacgggacaaggtgacccgagttgtgttattatgggtgaacaatcatttcagt
gactttgaaggagatcctgatatgaccagctttttggaggagttccagagcaatctggaa
agagagaaaatgacaggtcagttgcggttgctcaacatagcttgtgctgctaaagccaaa
cccagagtgattactataaataggcctgcacgagagatgcccctccccttcacacttatt
ggaggagctgaacgaggaacgcgcctctttatcagcagcgtggaagttggtagcaaagca
gaggaagcggggctcaaacgtggagaccagatattagaggtgaatgggcagacgtttgag
aacgtgcagttgtccaaagcaaccgaaattctcaaaaacaatacacagctctgtatgagt
gtcaaaaccaacctcctggtcttcaaggagctggtggccagagtggcagaggaaaggaaa
aacggcgttcctcatcttccaaagattggtgacggaaagaaaaatagccgttattctgta
cctgaacttggggctggttctgatgtaataggtcaagaaaaggtcagcaagaaggtcaaa
gcgcacacaatgggcggccgaaacaaactcatgaagattctagacaagacacgcatgagc
atcctacctcagaaaccttacagtgacctcgggttagggcagactcaggatgacagcatt
gtgggattacgccagaacaaacagtctcagcccactatggcagtcagtggaaatctctca
tccagtaaccctgacctggcccaaggccagcaacgcatcattgactacagtacacagcca
ccagaattgcaagaccaggtgctgcgtgttttcaaggcagaccaacagagtcgttactta
ctgatcaatagggacaccacagcaagagaggcagccaatcaggcaatgcgagagtttggc
ttaacggcaagtcctgaagcctattcgctgtgtgaggtgtcagtcacacaggagggagtt
attaaacagagacggctacctgatcaactttctaaactggccgacaggatacagctgagt
gccaggtactacctgaagagcaacatggagacagaaacgctgtgttcggatgtggaagca
caggagatgcaacgagaatctgtggtccctttgttgtccttgagctccatggagatagcc
aatcagctctcagcacgaaactatctgcttttctctagcattgaaccaacagattacatc
agtgacctctttaagcttcatccacaagagcctcccaccaacctgcgcaattttgagggt
cttgtaaaccaggagaccttctgggtggccacagagatagtacaggaaaccaacctggcc
aaaagagtgaagatcatcaagcactttataaagattgcccttcactgccgtgactgcaag
aacttcaactccatgtttgccataattagtgggttcaatttagcaccggtcgctcggttg
agatctacatgggaacggttgcctggaaaatatgagaagcttcttgcagaattacaggat
gtttttgacccttctcgcaatatggccaaataccgcaacctcctcaacaaacacaacctt
cagccaccggtcatccctctgtttcctgtcattaagaaagacctcacctttcttcatgag
ggcaacaactccaaggtggacggtctggtgaattttgagaagttgaggatgattgcccga
gagatcagacacgtggttcgaatggcttccatcaccatggaccctgcattgctttttaag
actaggaagaaaaagtggagaagtcttgggtctctaagtcaggtgagcagctcttctctc
tctgacattggaacaatgggtgggaagaggaaggggaggcggagctcctttctcagcgct
aaaaaactctatgaggtggagatgatgagcagacgcgtgcggcagtatctggacacgcac
tcacacgagagtgatgaggacaaactccatgaactctctttgcagtgtgagcctgccagc
agctcaacaatgaagaactcaggtgataggaggcgagtggatgtatctcctgtcggtcaa
agaagcaccactccacagcaaactaatggaaatcatggtcgcaagaaatcacttagcaaa
gacctaccaccattcgaagaagggcgggacagacagcgaaagccacctgaggacagccag
tcaaatacttcatctctactctcctctccacgtacctcacctcacagcacaccgagaaaa
gccccacagttagtggtgagtgaagcatcagatcagctgagtttgttaagctcctcctcc
tctgatctcatcatggttgatgaccacacccatactcagccccatatgcttgcacaccca
ctcagcgcacgtagagctgaacctgaccaaataagcctggggtcctactccttgactcag
gatcagtgtgaccgtgcatcattggatgcagcagacagtggccgtggcagttggacgtcc
tgttccagtggttcccatgacaacatccaaagtattccaccgcgtgtgggttattatgac
aatcgcagctgggagacactttcagaagggatgggacgtagtcacgtgacaacacctact
ggttactgggccgatgaattggaaggagacacaggaacgataaaacgtagaggtgggaaa
gacgagactccaaacgcaagcaagaatactccaaatcggagggatggacgttttagagag
ccaccgcccacaccacctggttatactgctctgtcattggctgaggcagacagccacagt
cacgcacatgggcgacgcccaccagattacacagcagctctgcagaggtctcgattcctt
aaaaggtcatgtgatcctcctccactccacccatccagtagattgccagcatacaaccac
tgccagtcaccgcgacgaacacaaccggatgaaaatgagcaaatatctgcggtttaa
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