Labeo rohita (rohu): 127163687
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Entry
127163687 CDS
T09007
Symbol
prdm4
Name
(RefSeq) PR domain zinc finger protein 4
KO
K12463
PR domain zinc finger protein 4 [EC:2.1.1.-]
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lroh03000
]
127163687 (prdm4)
Transcription factors [BR:
lroh03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
127163687 (prdm4)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf_PR_Knuckle
zf-H2C2_2
zf-C2H2
zf-C2H2_4
SET
zf-C2H2_jaz
zf-H2C2_5
zf-C2H2_6
zf-C2HE
zf-C2H2_2
Motif
Other DBs
NCBI-GeneID:
127163687
NCBI-ProteinID:
XP_050962966
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Position
4:33932885..33941587
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AA seq
828 aa
AA seq
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MNDMNLSPVGMDQLSVPPVSASHLGLPTSPTHNPITTPGMPVAIPSLGPSLGPLPSALSL
MLPMGPLGDRGVMCGLPERNYTLPPPYPHLENSYFRHILPGILSYLADRPPPQYIHPSSL
NMDGTLSVSNNNPSGLDPYSGPGGPLDQGLVTLDTRPVGGQADLHQGGSHEVQLDTTGLT
MESRVSSPMSPDGMEEDLATMEGVVVAETQQQLGARPQPHEGLAGVDSSGGVMPLHGAGL
ELPVVMEQEHMGGRVGTNTTGAGGPGTLSEALHSTGELNSGVVSVVLTGAMPPQTQLEQV
SLHGPSGMGLEPVNVSPITAEVSLGPDNSLVLVNSTLQLEDSTSNKENMATAFNIWCTLC
ERSYPSDCPEHGPVTFIPDTPIQSRARLSLPRPLCLRISVADEPIGVFARETIPSRTCFG
PMVGQHCSNVELTDWSDKDTPQIWKIFHNDIQEFCIVTTDEHECNWMMFVRKARTTEEQN
LVAYIDNGKLYFCTSREILPDQELLFYYSRDYSRQLGVPRVPEGQICHCGKECASFTELK
SHLSSHAQSHSPTQDHPAHATHNQSQSQEKVTNEASRSASSPQWQCHSDVNEHSNSSSSS
NGHGRERKFKCSMCTRAFTTSTKLNVHYMGHMGMRPHKCSYCSKAFSDPSNLRKHLRIHT
GQKNFRCTVCGKSFTQKAHVESHMVIHTGAKNIKCDHCDKMFVRKQDLKQHMYSHSLDRQ
ITCPKCDKQFLKTDHLKKHLNSHDGKRDFICEKCNKGFLTKYHLTRHLKICKGPKIGRGA
AQGEEGEEEEDEEEEDEEEEREAEGQINPANEEECGIGMRGYTSEKTM
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
atgaacgacatgaacctcagcccagtgggcatggaccagctcagcgtgccgcctgtgagt
gcaagtcacctcggtctccctacatctccaacgcacaatcccatcaccactccaggcatg
ccagttgctatacccagtttggggccatcacttgggcctcttccttctgcactgtctctg
atgttacccatgggtcctttaggggacagaggagttatgtgtggccttccagagagaaat
tatacattacctcctccatacccacacctggaaaacagctacttcagacatatccttcca
ggtattctgtcatatctggcagatcgtccccctccccagtacattcatcccagcagcctt
aacatggatgggactctttccgtgtccaacaacaacccctctggcttagacccgtacagc
ggtcccggcggacctctagatcaaggcctggtgaccctagacacaagaccggtcggaggc
caggctgatctccatcaaggaggctctcatgaagtgcagctagacaccacaggactaacc
atggagtcacgtgtaagtagtccgatgtctcctgacggaatggaggaggacttggccacc
atggagggtgttgtggtggcagagacccagcagcagctgggcgccagacctcagcctcat
gagggtctggcaggtgtggactcctcaggaggtgttatgcccctgcatggagcagggctg
gagctcccggtggtgatggagcaagagcacatgggcggcagagtaggaaccaacactaca
ggagcgggcggtccagggacgctaagtgaagccttgcactccaccggagaactgaactct
ggggtggttagtgtggtgctcacgggggccatgccgccacagactcaactagaacaggta
tctctgcatggaccttcaggaatgggactcgagcctgttaacgtgtcacccattaccgca
gaagtgtctcttgggccagacaacagtctagtgctagtgaactctacattacaactagaa
gattcaacatctaataaggaaaacatggccactgccttcaacatatggtgcactttatgt
gagcggtcatatccgtcagactgtcctgagcatggacctgtcacattcatcccagacaca
cccattcagagcagagcccgcctctctctgccccgccccctgtgcctccgcatttctgta
gctgatgaaccaattggtgtgtttgctagagagactataccatccaggacctgctttggg
ccaatggttggacagcactgtagcaatgtggaacttacagactggtctgataaggatacc
cctcaaatatggaagatattccacaacgatatccaagagttctgtattgtgacgacagat
gagcatgaatgcaactggatgatgtttgtacggaaagcaaggactacagaggaacagaat
cttgtggcatatattgacaacgggaagctgtatttctgcacatcaagagagattctgcca
gatcaggagctgttgttttattacagcagggactacagcagacagctaggtgtacccaga
gtgccagagggacagatatgtcattgtggaaaagaatgtgcctctttcacagagttgaaa
tcccacctcagcagccatgcccagagccacagcccaacccaggaccaccctgctcatgct
acacacaaccaatcccagtcgcaggagaaagtgaccaatgaggcttcccgctccgcttcc
tccccacagtggcagtgccactccgacgtgaatgaacattccaacagcagcagcagcagc
aacggccatggtcgtgagaggaagtttaaatgcagcatgtgcacacgagcattcactacg
tctactaagctaaacgtgcattacatggggcacatgggcatgagaccacacaagtgtagc
tactgcagcaaagccttcagtgatcccagcaatctcagaaaacacctgagaatccacaca
ggtcagaagaacttcaggtgcacagtatgtgggaagtcttttactcagaaagcacatgtg
gaatctcatatggttatacacactggtgccaagaacattaaatgtgaccattgtgacaag
atgtttgtgaggaaacaagatctcaagcagcacatgtattcacattcactagaccgccag
ataacttgtccaaagtgtgacaaacaattcttgaagaccgaccatctgaaaaaacacttg
aactctcacgacggcaaacgggacttcatctgtgaaaagtgcaacaagggtttcctcact
aagtaccacctcacacgccacctcaaaatctgcaagggtcctaagatcggtcgaggggcg
gcgcagggtgaggaaggggaggaggaggaagacgaggaggaagaagatgaggaagaagag
agggaagctgaaggacagatcaatccagccaacgaggaagagtgcggaataggcatgaga
ggatatacttcagagaaaacgatgtaa
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