Labeo rohita (rohu): 127163691
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Entry
127163691 CDS
T09007
Symbol
erc1b
Name
(RefSeq) ELKS/Rab6-interacting/CAST family member 1 isoform X1
KO
K16072
ELKS/RAB6-interacting/CAST family member 1
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
127163691 (erc1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lroh04131
]
127163691 (erc1b)
Membrane trafficking [BR:
lroh04131
]
Exocytosis
Others
Others
127163691 (erc1b)
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
127163691 (erc1b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cast
RBD-FIP
Rod_CreS
CCDC39
CCDC18_1st
CEP135_N
CCDC192
PKcGMP_CC
ATG16
Motif
Other DBs
NCBI-GeneID:
127163691
NCBI-ProteinID:
XP_050962975
LinkDB
All DBs
Position
4:complement(40410161..40666232)
Genome browser
AA seq
1139 aa
AA seq
DB search
MYGSARSVGKVEGNHSGGSNQSPGRSPRLPRSPRLGHRRTNSTGGSGAGAGGPGGKTLSM
ENIQSLNAAYATSGPMYLSDNEVVASGPDLPKSTMTLGRSGGRVPYGVRTTVMGSSPNIS
TGAPGSVPTDAIAFGDHHMPSTLASTVPHSLRQARDNTIMDLQAQLKEVLRENELLRKEV
DVKESKLSSSMNSIKTFWSPELKKERALRKDEASKIAVWKEQYRVVQDENQHLQMTIQAL
QDELRIQRDLNQLFQQDSSVRPGEPLTAELTEENFQRLHGEHERQAKELFLLRKTLEEME
LRIDTQKQTLCARDESIKKLLEMLQSKGLSAKASEEDHERTRRLADAEMHIHHLESLLEQ
REKEMVLLREDLHRRFEGAPESAKTKALQTVIEMKDSKISSLERGLRDLEDEIQMLKSNG
ALSTEEREEEMKQMEVYRSHSKFMKNKVEQLKDELAQSEAQGEELKKRAAELQQEVSAID
QVKQDLSRKDTELLGLQTKLETLTNQFSDSKQHIDVLKESLTAKEQRAAILQTEVDALRL
RLEEKEATLNKKSKQIQEMSEEKGTLNGEIHDLKDMLDVKERKVNVLQKKIENLQEQLRD
KEKQMTSLKERVKSLQADTSNTDTALTTLEEALAEKERIIERLKEQRDRDEREKGEELDS
SKKELKELKEKVSVLQGELSDREASLLDLKEHASSLASSGLKKDSKLKSLEIALEQKKEE
CSKLESQLKKRSELMSGHPFNLAQSIAVEAQANAGLSERIATLEQEVARYKEDAGKAQAE
VDRLLEILREMENEKNDKDRKISELERQMKDQSKKVANLKHKEQVEKSKNAQLMEEARKR
EDNMNESSQQIKDSLRQKDDRIEELEEALRESVQITAEREMVLAQEESARANAEKQMEEL
LAAMEKVKQELESMKAKLSSTQQSLAEKEAHLTTLRAERRKHLEEVLEMKQEALLAAISE
KDANIALLELSSSKKKKTQDEVALLKREKDRLVHQLKQQTQNRMKLMADNYEDDHLKASN
SDQTNHKPSPDQIIPPLIDLNQNRSKLKLYIGHLTALCHERDPHILQDLAPPSAYHRSQQ
DAWEEELQKMSPEQLESELEQCERESAELQEYANSVLQQIADHCPDILEQVVNALEESC
NT seq
3420 nt
NT seq
+upstream
nt +downstream
nt
atgtacggtagtgcccgatccgtgggcaaagtggaaggcaaccacagcggcgggagcaat
cagagtcccggacgctcgcctcgtctccctcgctcgccccgcttaggccaccgccgcact
aacagcacagggggcagcggagctggagcgggaggtccaggtggtaaaaccctttcaatg
gagaacatccagtctctcaatgctgcctacgccacatccggccccatgtacctgagcgac
aacgaggtggtggcctccggcccggacctgccgaagagcaccatgactctgggtcgctcc
ggaggccgggtgccttacggcgttcgcacgaccgtcatgggatccagcccgaacatctcc
accggggcccccggctctgttcccaccgatgccatcgctttcggagaccaccatatgcct
tccacccttgcgtccactgtgcctcattcgctgcgccaagcgcgggacaacaccatcatg
gacctgcaggcccagctcaaggaggtgctcagggagaacgagctcctgcggaaggaggtg
gatgtgaaggagagcaaacttagctcttccatgaactccattaagaccttctggagcccc
gagctgaaaaaggagcgcgccctgcgcaaggatgaggcgtcgaagattgccgtgtggaag
gagcagtacagagtcgtccaggacgagaaccagcatctccagatgaccatccaggccctc
caggatgagctgcggatccagagagatctgaaccagctgttccagcaggactccagcgtt
cgtcccggcgagcccctgaccgctgaactgaccgaggagaacttccagcgcctgcacggt
gagcatgagcggcaggccaaggaacttttcctcctgagaaaaactctggaggagatggag
ctgcgcatcgacactcagaaacagacgctgtgtgctcgagacgagtccatcaagaagctc
ctggagatgttgcagagcaaagggctgtcggccaaggccagcgaggaggatcatgagagg
acgcggagactggccgatgccgagatgcatatccatcacctggaaagccttttggagcag
agagagaaggaaatggtcttgctgagggaggatcttcacagacgatttgagggagctcca
gaatctgccaaaaccaaggccttgcagactgtcatcgaaatgaaggactctaagatcagt
tctctggagcgcggcctgagggacctggaggacgagatacagatgctcaagtcaaacggg
gctctcagcacggaggagagagaggaagagatgaaacagatggaggtctaccgcagtcac
tccaagttcatgaaaaacaaggtagagcaactgaaggacgaactggcgcagagtgaagcg
cagggcgaggagctgaaaaagcgggcggctgagctgcagcaagaggtctctgcaattgac
caggtgaagcaggatctctccaggaaggacactgagctcttgggcctgcagactaaacta
gagacgctcaccaatcagttttctgacagcaaacagcacatcgatgtactcaaagagtct
ctcactgccaaagaacagcgtgctgccatcctgcagactgaggtcgacgctctgcgttta
cgtctggaggagaaggaggctacgctgaataaaaagagcaagcagattcaggaaatgtca
gaggagaagggcacgctcaatggagaaatccacgacctcaaagacatgcttgacgtcaag
gaacgcaaggtcaatgtcctgcagaagaagattgagaacctgcaggagcagctgagggat
aaggagaagcagatgaccagcttgaaggagcgcgtcaaatccctgcaggccgacacttca
aacacggacacggccctcaccacgctggaggaggccctggccgagaaggagcgtattatc
gagcgtctgaaggaacagagggacagagacgagagagagaagggcgaagaactggacagc
agcaagaaagagctcaaagagctgaaagagaaagtcagcgtactgcagggagagctgtcc
gatcgcgaggcctctctattggacctgaaggagcacgcctcgtccctggcctcctctgga
ctgaagaaggactccaagctgaaaagtctcgaaatcgctcttgagcagaagaaagaggaa
tgcagcaaacttgagagtcaactcaagaagcgctctgagctcatgtcaggccatcccttc
aatcttgctcagtccatcgcggttgaggctcaggcaaatgcgggactgtcggagcgcatt
gccacgctcgagcaggaggtggcgcgttacaaggaggatgctgggaaggcacaggccgag
gtggaccggctcctggaaatcctcagagagatggagaacgaaaagaacgacaaggatcgc
aagatcagtgagctggagaggcaaatgaaagaccaaagcaagaaggttgccaacctgaag
cacaaagagcaggtggagaaaagcaagaacgcccagttgatggaagaggctcgtaagcga
gaggataacatgaacgagagttctcaacagatcaaggattctctgcggcaaaaggacgat
cgcatcgaggagctggaggaggccttgcgtgaaagcgtacagatcacggccgagagagaa
atggtgttggcgcaagaggaatctgctcgtgcaaacgctgagaaacagatggaagagctg
ttggccgccatggaaaaggtgaagcaagagttggagtccatgaaggccaagctgtcgtcc
acccagcagtccctggccgagaaggaggcccacctgaccacactgagggcagagcgcaga
aagcacctggaagaggtgctggaaatgaagcaggaggcgctattggcagccatcagcgag
aaggacgccaacatcgctcttctagagctgtcgtcctcaaagaagaagaagactcaagat
gaggtggctctgctgaagagggagaaggaccgacttgtacatcagctcaaacagcagacg
cagaaccgcatgaagttaatggctgataactatgaggatgaccacctcaaggcctccaat
tctgaccagaccaatcacaaaccctctccagatcagattatccccccactcatagacctc
aatcagaaccgcagtaagctgaaactgtacatcggccacctcacggccctgtgccacgag
agagacccccacatcctgcaggacctggccccgccctccgcataccaccgcagccaacag
gacgcctgggaggaggagcttcagaagatgagccccgaacagctggaatccgagctggag
cagtgtgaacgagagagcgccgaactgcaggaatacgcaaactccgtcctgcaacagatc
gccgatcactgcccggacatcctggagcaggtggtcaacgctctggaggagtcgtgctga
DBGET
integrated database retrieval system
