Labeo rohita (rohu): 127163722
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Entry
127163722 CDS
T09007
Symbol
usp18
Name
(RefSeq) ubl carboxyl-terminal hydrolase 18 isoform X1
KO
K11846
ubiquitin carboxyl-terminal hydrolase 18/41 [EC:
3.4.19.12
]
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lroh01002
]
127163722 (usp18)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lroh04121
]
127163722 (usp18)
Enzymes [BR:
lroh01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
127163722 (usp18)
Peptidases and inhibitors [BR:
lroh01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
127163722 (usp18)
Ubiquitin system [BR:
lroh04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
127163722 (usp18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
ARM_KNTC1_1st
Motif
Other DBs
NCBI-GeneID:
127163722
NCBI-ProteinID:
XP_050963020
LinkDB
All DBs
Position
4:complement(42235515..42239108)
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AA seq
340 aa
AA seq
DB search
MGKFWSKMAYRLVVYSRSLSVDYEVRGLLNYSLSCCVNALLQSFSATTELLDILNKWRPS
DAIDETNVPLQLKNALEAMRDKSHPAPHEGFLNCLYRQAIRRFSQQDADEIFHMILNLSQ
KQMPDDAVAQEIRSLYEIKVETQVMCSECTYIHRISNSLFSLPLAICEGENTLESCINSF
FKQQKLVDSDKFYCDRCDEKQPSTHEVKLVSLPPILCVHLKRFRNNNGFTRKLYDKVAFP
ETFSTSIFAAGQSENTGSNCLKADEHYSLYAVIVHIGTSMSGHYTAYINSTQDQSWRYAD
DSQVHTATWEDVKNTYMGYRGSSATAYLLLYRKKSLDSSG
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgggcaagttttggagtaaaatggcttatcgactagtggtatacagccgctctctatca
gtggattatgaagtgaggggacttttaaactacagtctgtcctgttgtgttaatgctttg
cttcagtccttttctgctaccactgaacttctggacatactgaacaaatggcgtccatca
gatgcgattgatgagacgaatgtcccactgcagttgaagaacgccctggaagccatgagg
gacaaatcgcatcctgctccacacgaaggtttcctcaactgcctctatcgtcaagccatc
cgacgattctctcagcaggatgcagatgaaatatttcacatgatcctcaatctcagtcag
aagcagatgcctgatgatgctgtggctcaggaaatccgcagtctctatgaaataaaggtg
gagacccaggtgatgtgttcagaatgcacatacattcatcgtatatccaactctcttttc
agcctccctttggcgatctgtgaaggagaaaacaccctagaaagctgcatcaactctttt
ttcaagcaacaaaagctggtggacagtgataagttttactgtgaccggtgtgatgaaaag
cagccgtccactcatgaagtgaaacttgtctcattgcctccgattctgtgtgtccacttg
aaaagattcagaaacaacaatggcttcaccaggaaactctacgacaaagttgcttttcct
gaaacattcagcacttctatttttgctgcagggcaatcagaaaatactggatctaattgt
ctcaaggctgatgagcattacagtctctatgcagtaatagtgcatataggaacttccatg
tctggtcactacactgcttatatcaactcgactcaggaccagtcgtggcgctatgctgat
gacagccaagtgcatacagccacatgggaagatgtgaagaatacatatatgggataccgt
ggctctagtgccacggcctacttgcttctgtacaggaagaagagcttggattcatctgga
taa
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