Labeo rohita (rohu): 127163791
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Entry
127163791 CDS
T09007
Symbol
tulp4a
Name
(RefSeq) tubby-related protein 4a isoform X1
KO
K24720
tubby-related protein 4
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
lroh04990
]
127163791 (tulp4a)
Domain-containing proteins not elsewhere classified [BR:
lroh04990
]
Other domain-containing proteins
Tubby family proteins
127163791 (tulp4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR35_TULP_N
Tub
WD40_WDHD1_1st
ANAPC4_WD40
Beta-prop_WDR19_1st
WD40_CDC20-Fz
Beta-prop_RIG_2nd
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
WD40_Prp19
WDR55
DUF3527
Motif
Other DBs
NCBI-GeneID:
127163791
NCBI-ProteinID:
XP_050963141
LinkDB
All DBs
Position
4:46292538..46308919
Genome browser
AA seq
1749 aa
AA seq
DB search
MFAAVEHGPVLCSDSNILCLSWKGRVPRSEKEKPVCRRRYYEEGWLATGNGRGVVGVTFT
SSHCRRDRPTPQRINFNLRGHNSEVVLVRWNEPFQKLATCDTDGGIFVWIQYEGRWSVEL
VNDRGAQVSDFTWSHDGMQALISYRDGFVLVGSVSGQRHWSSEINLESQITCGIWTPDDQ
QVLFGTADGQVIVMDCHGRMLAHILLHEAEGIASMAWNYPNFLVEDSSESDTDSDDYTPL
QVHSLKPLLTVCFTSGDVSLMSNYDDLSPTLIRTGLKDVVVQWCSQGDLLAVAGMERLVM
TSDPTQATRNAIVKFYNVRGEHIYSLETPAQRPISTLCWGHRDSRLFLASGPALYVLRVE
HRVASLQLLCQQVIASAVHEEKDVAKLSMPSRLSTYVSSAFAPTIKPPIPDPNNMRDFVS
YPTSGNERLHCTMKRTEDNPEVGGPCYTLYLEYLGGLVPILKGRRISKLRPEFVIMDPKT
DGKTDEVYGNSFIPSMIDSCNCSDSSDIELNDDWVGKKSPKISRGSKSPKLPRDLVCPFT
NRINIDPRKSPKLSRTAQEISRSPRLPIRKPSIGSPSLTRREFPLDDITQHNYLAQVTSN
IWGTKFKIVGLAAFLPTNLGAVIYKTSLLHLQPRQMTIYLPEVRKISVEYINLPLFSPNV
FSEDEDDLPVTGASGITDDNPPCTVNIPIAPIHSPAQAMSPTQSIGLVQSLLANQNVQLD
VLSNPTSTVAPPGVSDQAQQDTVLTAQYTVPARYSSPGQVIFGGMEVGRLLVAQSQQQQQ
QQQSQQQQQQQQQQQLQLQQHYQQQQHQQLQQQLQQYQLQQQQLLQHQHMQQQQQQHMQQ
QIQQQMQQQLQHQIQQQHLQMQLQLQHQQMQQQLQQHQIQIPVPTLPSGQPSCPVIQLPQ
SAIPVAPPTAEHSTERGEHELLLKIKTTRSAPQLAEGDAVVFTAPLEISKMNPPPPYPGT
VAAAVAAATVTVSAAASTSSTAGATGSGSSASSSGEVCVKKGDLTLYPPGAQAAQYPTPL
GYERITTFDSSGNVEEVCRPRTRLVCNQNVYTLQGPGSSATLRVSSSSSAVEGKKVQLPY
ASATLNRLTVPRYSIPSGDPPPYPDPANQVGAGRNPGQRLDSSLIHATMRRNSREAALKV
SQMLDPQRTLPSKAKASTLSASYQPRGPTALYTCSQCSSNGAVGGGAASGGSNGIAGGTI
IRQDFPPTGGGAPHSTVIVHSNSASPLPSQSSYSLLSMDGTGGVASGAGNRERADYINSA
FTEDEALNQSLRQMALGTEVVSLTVKRPPPYQWDPSATEEIWVPQERTASLPTSGPPASH
KPPPLILSPAQHLDVSRLPFVLSPKSPTSPNATTFQPAGAYQIALPYPPSAGYGGPPLQT
VQASPRPASPKEVVTPLPFSQQDQAVLLPPGYPPSLPNIACCPLPPMYPGTASCSNLPVT
PIPLHPWGSYNPCPPMPSPPGPAPSLPPKTSHMLDKPVLSPPPQPQPPPLPTPPPDLQSA
VSPPEAIAEAGEGFQEVLSLNESPVPQRADRFGKKNRKRLDNSRADEANVPAITEGGSKS
KKEGRALGDFNSLISSPRLGGRDKKKPKGQKEQLKAKKLSKATTNEFQDSSESEPELFIS
GDELMNQSQSGKKSWKAKRNLRAGGCELDEIKCRKANEKEDRGLGSQGFVYVMANKQPLW
NEATQVYQLDFGGRVTQESAKNFQIELEGRQVMQFGRIDGNAYILDFQYPFSAVQAFAVA
LANVTQRLK
NT seq
5250 nt
NT seq
+upstream
nt +downstream
nt
atgtttgcggcggtggagcacgggcccgtcctgtgcagcgactccaacatcctgtgcctc
tcctggaagggccgcgtgccccggagcgagaaggagaagcccgtgtgcaggaggcgctac
tatgaggagggctggctggccacggggaacggcaggggcgtcgtgggcgtcaccttcacc
tccagccactgcaggagagaccgacccacaccacagcgcatcaacttcaacctgagggga
cacaacagtgaggtggtgctggtgcgatggaacgagccctttcagaagctggccacctgc
gacaccgacggcggcatcttcgtttggatccagtatgagggccgctggtctgtcgagctg
gtcaacgaccgaggagctcaggtcagcgacttcacctggtctcacgacggcatgcaggcg
ctgatctcctaccgcgacggcttcgtgctggtgggctcggtgagcggccagcgacactgg
tcctccgagatcaacctggagagtcagatcacctgtgggatctggacacccgacgaccag
caggtgttgtttggcacggcggacgggcaggtgatcgtcatggactgtcacgggcggatg
ttggctcacatcctgctgcacgaggcggagggcatcgccagcatggcgtggaattatccc
aacttcctggtggaggacagcagcgagagcgacacggactcggacgattacacgcctctg
caggtgcacagtctgaagccgctgctgaccgtctgcttcacgtctggagacgtcagtttg
atgagcaactacgatgacctctcacccacgctaatacgcaccggcctcaaagatgtggtg
gtgcagtggtgctctcagggcgacttgctggctgttgctgggatggagagactcgtgatg
acctctgacccgacccaagccacccgaaatgccattgttaagttttacaatgttcgtggt
gaacacatttactcactggaaacacctgctcagaggccgatcagtacgctgtgctggggc
catcgggactcgcgtctgtttctggctagcggcccggcgctgtacgtgctgcgcgtggag
cacagggtcgccagtctgcagctgctgtgccagcaggtcatcgccagcgcagtacacgag
gagaaagacgtggccaagctcagcatgccctctcgcctaagcacatacgtgtcttctgcc
ttcgctcccaccattaagccccccatcccagatcccaacaacatgcgggactttgttagc
tatccgacgtcgggaaacgaacgtctccactgcaccatgaagcgcaccgaggacaacccg
gaggtgggcggcccgtgctacaccttgtaccttgagtatctgggggggctcgtcccgatt
ctgaaaggccgtaggattagcaaacttcgccctgaatttgtcatcatggacccaaagact
gacgggaaaacagatgaagtgtatggaaacagcttcatcccctccatgatcgacagctgc
aattgctcagattccagtgacattgagctcaatgatgattgggttggaaagaaatcacca
aagatctccagaggcagcaagtctcccaaacttcccagagacttagtgtgtccctttacc
aacaggataaatatagatccccgtaagtcccccaagctctcccgcaccgcgcaggaaata
tcccgatcgcctcggttacccattcgcaagccctccatcggctctccgagcctgactcgg
cgagagtttccgctagacgacattacgcagcacaattatcttgcgcaagttacatcgaac
atatggggaacaaagttcaaaattgtggggcttgcagcatttttgccaacaaatcttggt
gcagttatctacaagacaagtctgcttcacctccagcccagacagatgaccatctacctt
cctgaggtgaggaagatctcagtggaatacattaacctacctttgtttagtcctaatgtc
ttcagtgaggatgaggatgacctgcctgtcacaggcgcatcaggaatcactgacgataat
ccaccttgcactgtcaacatacccatcgcccccatacacagccccgcccaagccatgtcc
ccaacccaaagcattggccttgtccaatccctgttagccaatcagaacgtccagttagat
gtattgtccaatccaacatcgactgtggccccgcctggggtttctgaccaagcacagcag
gacactgtgcttacggcccagtacactgtccctgccaggtattccagtcctggacaggta
atctttggaggtatggaagttggtcggcttttagttgcgcaatcccaacagcagcagcag
cagcagcaatcacaacaacaacaacaacaacaacaacaacagcagctgcagctgcagcaa
cattatcagcagcagcagcatcaacagctacagcagcagcttcaacaatatcagctgcag
cagcaacagttgttgcagcatcagcacatgcagcaacagcagcagcaacacatgcaacag
cagatccaacaacaaatgcagcaacagctgcagcatcaaatccaacagcagcatctgcaa
atgcaactgcagctgcagcaccagcaaatgcagcagcagttgcagcagcatcagatccaa
atccctgttccaactttgccctcaggtcaaccatcatgcccagtcattcagcttccgcag
agtgcgataccagtcgctccccctacagcagagcacagtacggagcgcggggagcatgag
ctcctgcttaaaattaaaactactcgttctgccccacaactggctgagggtgatgctgtc
gtttttaccgcccctcttgagattagcaaaatgaaccctccccctccttaccccggcaca
gtcgccgctgcggtggcggctgccacagttacagtttcggctgccgcttctacgagttcc
accgctggggcgacgggaagcggctctagcgcttcatcctcaggggaagtttgtgtaaag
aaaggggacctgaccttgtatccacccggtgcgcaggcagctcagtacccaaccccgctg
ggctacgagcgcatcaccacgtttgacagcagcggaaacgtggaggaggtgtgccgcccc
cgcacgcgacttgtttgcaaccagaatgtttacacgctgcagggcccgggaagctctgcc
accctcagggtctcatcatcttcctctgcggtagaggggaagaaggtgcagctgccctac
gcctcagccacgttgaaccgtctcactgtgccaaggtactctatacccagcggggaccca
cccccttaccctgacccagccaatcaggtcggagcagggcggaacccgggccagagactg
gacagcagcttgattcacgctaccatgaggcgcaacagtcgggaagctgcgctgaaggtt
tctcagatgctggatccccagaggaccctaccctccaaggccaaagccagtactttgtcc
gcttcctaccagccgagagggccaacggctctttacacgtgcagccagtgcagcagtaac
ggcgccgtcggcggtggggccgccagcggtggaagtaacggaatagctggggggacgatc
attaggcaagatttcccacccaccggaggtggtgcacctcacagcactgtcatagtgcac
tccaacagtgcctcgcctctgccttcccaatcctcctacagcctgctcagtatggacggc
accggcggagtggctagtggagctggaaaccgggaaagggctgactatatcaactctgcc
tttacagaggacgaggcattgaatcagtctctgaggcaaatggctctcggtaccgaggtg
gtgagtttgacagtcaaacggccaccgccgtatcaatgggatccatctgccactgaagag
atctgggttcctcaagagcgtacggcgtctctgcccacctctggacctcctgcctcccac
aaacctcccccactcatcctcagccccgcgcagcatctggacgtttcccgtcttccgttc
gtcctctcgccgaagtctccgacaagtcctaacgccacaaccttccagccggcaggagcg
taccagattgctcttccctatccgccaagtgcgggctacggcggtcccccccttcagacg
gtgcaggcttctccacgtcccgcatctcccaaagaggtggttactcctcttcccttttcc
cagcaagaccaagcggtgctcttgccaccgggctatcctcccagtttgcccaacattgcg
tgctgccccctcccaccaatgtaccctgggacggcttcttgttctaatctgcctgtgaca
cccattcctctccatccatggggttcttacaatccctgtccgcccatgccaagccccccg
ggtcctgccccgtcccttccgccaaagacctcccacatgctggataagcctgttctgtct
cctccccctcaacctcaacctccccctctgcctacgcctcctccagacctccagagcgcg
gtcagtccccctgaggccatcgccgaggctggggaaggctttcaggaggtgctctcgcta
aacgaaagcccggttcctcaaagagcggaccggttcggcaagaagaaccggaagcgtttg
gacaacagtcgggcagatgaagccaacgttccagcgatcacggaagggggcagcaagtcc
aaaaaagagggccgtgccctcggtgacttcaactccctcatctccagtccgaggttaggc
ggaagagacaagaagaaaccgaaaggccagaaagagcagctgaaagccaaaaagctaagc
aaggccaccacaaatgagttccaggacagctccgagagcgagccggagctcttcatcagc
ggcgacgagctgatgaaccagagccagagcggtaaaaagagctggaaggccaaaaggaac
ttgcgggcgggaggctgcgagctggacgagatcaaatgccgaaaggccaacgagaaagaa
gaccgtggcctcggcagccaaggcttcgtctacgtcatggccaacaaacagcctctttgg
aacgaagccacgcaggtctaccagctggacttcggaggaagagtcacgcaggagtcggca
aagaacttccagatcgagctcgagggcagacaggtgatgcagttcggaaggatcgacggg
aacgcgtacatcctggactttcagtaccccttctcagctgtgcaggcttttgctgtagca
cttgctaatgtcacccagcgcctcaagtga
DBGET
integrated database retrieval system
