Labeo rohita (rohu): 127163793
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Entry
127163793 CDS
T09007
Symbol
lrrtm1
Name
(RefSeq) leucine-rich repeat transmembrane neuronal protein 1
KO
K16665
leucine-rich repeat transmembrane neuronal protein 1/2
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
127163793 (lrrtm1)
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_1
LRR_9
LRR_14
LRR_LRWD1
LRR_NXF1-5
LRRNT
Motif
Other DBs
NCBI-GeneID:
127163793
NCBI-ProteinID:
XP_050963196
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Position
1:complement(21597316..21600582)
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AA seq
524 aa
AA seq
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MLMDFLLIGLYLKWPLRKPPGLILCSLGIVLKIVPLVGGSCPRPCRCDNKLLYCEGLNLT
DIPQNLSSAIGLSLRENNISELREGNFVGLSQLTWLYLDHNNIEIVEENAFERLRRVKEL
DLSTNRIESLPNGTFRPLPNLRILDLSYNRLQSLEPDLFHGLRKLTNLHLRYNALKFIPV
RIFQDCRSMQFLDLGYNQLQSLARNSFAGLFKLTELHLEHNELVKVNLAHFPRLISLRTL
YMRNNKATIVVSTLDWTWDHLEKIDFSNNEIEFIEPHVFESVPNLKTLMLDSNKLTYIDQ
RILDSWTSLSSISLSGNDWECSRNVCALASWLSNFQGQRDSGLLCASPDIAQGEDILDAV
YAFQLCEDNVEATTQTFTATRNRARGFIYDGPTRNPYDLQDVEGGEVVTNSLTVTASADD
LESTMQIHKVVTGTMALIFSFLIMILMLYVSWKCFPAGIRQLRQCFTSQRRKQKQKQTMQ
QMATTSASEYYVDYKPNHIEGALVIINEYGSCTCQQQTSRECEV
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atgctaatggatttcctcctaattggtctgtacctaaagtggccgctaaggaagccccct
gggctaatactgtgctccctgggcattgttctgaaaatagttccgttggtgggggggagc
tgtccgaggccgtgccgatgcgacaacaagctgttgtattgtgaagggctcaacctgact
gacatcccccaaaacctgagcagcgccattggcttgtccctgcgtgagaacaacatctcc
gagctgcgggaggggaactttgtgggcctgtcgcagctaacctggctctacttggatcat
aacaacatcgagattgtggaggagaatgccttcgagaggctgcgaagggttaaagagttg
gatctgagcaccaaccggatagagagcctgcccaacgggaccttcagacctctgcccaac
ctgcgaatattggatttatcctataacagacttcaatccttggagccagaccttttccat
ggccttaggaagcttaccaatttacatttgcgctacaatgcccttaaattcatccctgtg
cggattttccaggattgcaggagcatgcaattcctggatctgggttacaaccagctgcag
agcctggcacgtaattcatttgccggactcttcaagctcactgagctgcatctggagcac
aacgagttggtgaaagtcaatctggcccatttcccccgcctcatatccctgcggaccctc
tacatgcggaacaataaggccaccattgtggtcagcacccttgactggacctgggaccac
ttggagaagattgacttctccaacaatgagatagagttcatcgagccacatgtgttcgag
agtgtgcccaaccttaagactcttatgctggactcgaataaactgacttacatagatcag
cggattttggactcatggacatccctgagcagcatcagtctgtcgggtaatgactgggaa
tgcagccggaatgtctgtgccttggcttcctggcttagcaacttccagggacaacgtgac
agtggcctgctgtgcgccagcccggacattgcacagggtgaggacatactggatgccgtc
tacgctttccagttatgcgaggacaatgtggaagcaaccacgcagaccttcaccgcaacc
agaaaccgcgccagaggcttcatatacgatgggccgacgagaaacccctacgacctgcag
gacgtggagggcggggaagtggtgaccaactccttaacggtgactgcgtctgctgatgac
ctggagagcaccatgcagattcacaaggtggtgacaggcaccatggccctcattttctcc
ttcctgatcatgatcctcatgctctacgtgtcctggaaatgtttcccagcaggcatcagg
cagttgaggcagtgcttcaccagccagcgtcgcaagcagaagcagaagcagaccatgcag
cagatggctactacgtctgcgtccgagtactacgttgactacaaacccaaccatattgag
ggggcacttgtcatcatcaacgagtacggctcttgcacgtgccagcagcagacatctcga
gagtgcgaggtgtga
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