Labeo rohita (rohu): 127163807
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Entry
127163807 CDS
T09007
Name
(RefSeq) solute carrier organic anion transporter family member 1C1-like
KO
K08747
solute carrier organic anion transporter family, member 1C
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
127163807
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lroh02000
]
127163807
Transporters [BR:
lroh02000
]
Solute carrier family (SLC)
SLC21/ASLCO: Organic anion transporter
127163807
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
OATP
MFS_1
Kazal_2
Kazal_1
Motif
Other DBs
NCBI-GeneID:
127163807
NCBI-ProteinID:
XP_050963212
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Position
4:23937334..23950761
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AA seq
686 aa
AA seq
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MSVEKKTAREPCCSKLKMFLAALSFVYFAKAFQGSYMKSSVTQIERRFDIPSSLIGFIDG
SFEIGNLLVIAFVSYFGAKLHRPRLIGAGCLIMAMGSFITAAPHFFQGLYKYESTVSSSN
GTKSFLPCLTNGSLAQDNENPTAEAQAECEKAASSSLWLYVFLGNMLRGVGETPVMPLGL
SYLDDFSREENTALYMAIVQTVGIMGPMFGFMLGSFCAKLYVDIGAVDLDTITINHKDSR
WVGAWWLGFLLTGGVMLLAGIPFWFLPKSLPKQGETETEKKSNALEGEQDHFIPDNKHST
APNKTDPVSMVALAKDFLPSLKTLFSNTIYVLLVCTAFVQVNGFIGMITFKPKFMEQIYG
QSASRAIFLIGIMNLPAVALGIVTGGFIMKKFKLNVVGATKVCIGTSLLAFCSMLVQYFL
QCDNSQVAGLTVSYQGAPHVSYQPDTLISSCNMGCFCSLKHWDPICASNGLTYASPCLAG
CQTSTGDGRDMVFHNCTCIGESPLSYANMSAVLGQCSRKSDCDYMFKFYMAVTVVGAFVS
ACGATPAYIILLRSINPELKSLAIGIYTLIVRTLGGIPPPIYFGAFIDRTCLKWGTKQCG
GRGACRIYDSGAFRNAFLGLIYGLYSLSYLLWGVLYYKLCRREKKLALKNQLIAPEQDGN
GVSAGNGNVSSAIVKCSENPDQETTI
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtggaaaagaagacggcacgagagccatgctgctccaaattaaagatgtttttg
gctgctttgtcttttgtgtactttgccaaagcatttcagggcagctacatgaagagctct
gtcacacagattgagagacgttttgacattcccagctcgctgattggattcattgatggg
agttttgaaattggaaatctgcttgtaatagcttttgtgagttactttggtgctaagctt
catagaccacgactcataggagctggatgtttaatcatggccatgggatccttcataact
gcggcaccacatttctttcaaggactgtacaaatatgagtcaacagtgtcttcctctaat
ggtacaaagagttttctaccatgcttaaccaacgggagtcttgcacaagataatgaaaat
cccacagcggaagctcaagcagagtgtgagaaagcagccagttcctctttgtggctctat
gtctttcttgggaacatgcttcgtggggtaggagagacacccgtcatgcctcttgggttg
tcttatctggatgatttttcgagggaagaaaacactgctctttacatggctatcgtacag
actgtgggaataatggggcccatgtttggatttatgttaggatctttctgtgccaagctc
tatgtggacataggagcagtggacttagataccatcaccatcaaccacaaagactcgcgt
tgggttggcgcttggtggctaggctttttgttaactggtggagtgatgttactggctgga
attcccttttggttccttcccaagtctcttcctaagcagggtgagactgaaactgagaaa
aaatcgaatgctctagagggtgagcaggaccatttcattcctgacaacaaacacagtact
gctcccaacaaaacagatccagtttccatggtagctttggctaaagattttctgccatca
ctgaaaacactcttcagcaacacaatttacgtgctccttgtatgcaccgcttttgtgcaa
gtcaatggttttataggaatgatcacattcaagccaaaatttatggagcaaatttatggc
cagtcagcatcgagggccatatttttgataggcattatgaatctaccagctgtggctttg
ggaattgtcactggtgggtttataatgaagaagtttaaactgaatgttgtcggagcaacg
aaggtctgcattggaacgtctcttctggccttctgttcaatgcttgttcagtatttcctg
caatgtgacaactcacaagtggctggacttacagtatcatatcaaggggctccacatgtg
tcctaccagccagatacactaatttcttcatgtaacatgggttgcttctgctctctcaaa
cattgggatccaatatgtgccagcaatggcttgacctatgcctccccctgcctcgctggc
tgccaaacctccaccggtgatggcagggatatggtattccacaactgcacctgtattgga
gagtcacctctctcatatgcaaacatgtcagcagtgctgggccagtgctctcgcaagagt
gattgtgactacatgtttaaattctacatggcggtgacagtcgttggtgcctttgtctcg
gcttgtggggccacaccagcttacattattctgctcagatccataaatccagaactaaag
tccttggctattggtatttatactttgatcgttcggactctgggtggcattccccctcct
atttatttcggagcctttattgacaggacctgtctgaaatggggcacaaaacaatgtgga
ggaagaggagcgtgtcgtatctatgattctggtgccttcagaaatgctttcttgggtctt
atttatggcctgtatagcttatcctatttgttgtggggtgtcctgtactataaactctgt
cgtcgtgaaaagaagcttgcactaaagaaccaattaatagctccagaacaggatggcaat
ggtgtttctgctggcaatgggaatgtatcttcagctatcgtaaaatgcagtgaaaaccca
gaccaggagaccactatctga
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