Labeo rohita (rohu): 127163824
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Entry
127163824 CDS
T09007
Symbol
mkrn1
Name
(RefSeq) probable E3 ubiquitin-protein ligase makorin-1
KO
K15687
E3 ubiquitin-protein ligase makorin [EC:
2.3.2.27
]
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lroh04121
]
127163824 (mkrn1)
Enzymes [BR:
lroh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
127163824 (mkrn1)
Ubiquitin system [BR:
lroh04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
127163824 (mkrn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MKRN1_C
zf-CCCH_4
Torus
zf-CCCH
zf_CCCH_4
zf-CCCH_2
zf-CCCH_3
zf-RING_UBOX
zf-C3HC4
zf-RING_2
zf-ANAPC11
zf-rbx1
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
127163824
NCBI-ProteinID:
XP_050963239
LinkDB
All DBs
Position
4:complement(35971912..35983167)
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AA seq
438 aa
AA seq
DB search
MAEAAAASTAAPAVIGGWTKHVTCRYFMHGLCKEGDNCRYLHDLSSCKPTMICKFFQKGC
CAFGDRCRYEHTKPAKQDEVPSSKPSVPLTAAPLAGTPDPVSDGPGGTTDAQEKPQGLGA
VDWVNAAEFVPGQPYCGRADPVPLEGPGPLIEEEYEKELANKEMKKQLCPYAAVGECRYG
LNCAYLHGDVCDMCGLQVLHPSDTSQRSQHIRACIEAHEKDMEISFAIQRSKDMMCGVCM
EVVFEKTNPSERRFGILSNCSHCYCLKCIRKWRSAKQFESKIIKSCPECRITSNFVIPSE
YWVEDKEEKQQLIQKYKDGMGSKPCRYFDEGRGTCPFGANCFYKHAFPDGRLEEPQPQRR
QTGSNGRNRNSRRTPLWDLFDERENSDSFDNEDEMVTFELSEMLLMLLAAGTDDDVTDSE
DEWDLFHEELDDYYELYL
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggcagcggcagcgtcaacagcggctccagcagttatcggaggctggacgaag
cacgtaacctgcaggtatttcatgcacgggctttgcaaagagggcgacaactgtcgatat
ttacacgacctcagcagctgcaagccaaccatgatctgcaagttctttcaaaagggatgc
tgtgcttttggggaccgttgcaggtatgaacataccaaacctgccaagcaagacgaagtc
cctagttctaagccgtcggtgccgctgaccgctgctccccttgctggcactcctgatccc
gtgtctgatgggccaggtggcacaaccgacgcccaggagaagccccaaggcttgggggca
gtggactgggtcaatgctgccgagttcgtgccagggcagccctactgtgggagggctgac
ccagtgccgttggaggggcctggacctctcatcgaagaggagtacgagaaagaactagct
aacaaagaaatgaagaaacagctttgcccgtacgccgccgttggcgaatgtcgctatggc
ctcaactgcgcctacctccatggtgatgtttgcgacatgtgcggcctacaggtcctccac
ccttccgacacctctcagcgctcgcaacacatcagggcctgcattgaggctcacgagaag
gacatggaaatctcgtttgccatccagcgtagtaaagacatgatgtgtggcgtgtgcatg
gaggtggtgtttgagaaaaccaaccccagtgaacgtcgtttcggcatcctctccaactgc
agccactgctactgcctcaagtgcatcaggaaatggcggagtgccaagcagttcgagagc
aagatcataaagtcctgtcccgagtgtcgaatcacatcgaactttgtcataccaagcgaa
tactgggtggaggacaaagaggagaagcaacagctcattcagaagtacaaggatggcatg
gggagtaaaccatgccgatattttgatgaaggccgtgggacctgtccgtttggggccaac
tgcttttacaagcatgcctttcccgacgggcgtctggaagagcctcaaccccagaggaga
caaaccggctccaacggaagaaaccggaactccagacggacgccactctgggatcttttc
gacgagcgggagaacagcgactccttcgacaacgaagacgagatggtgacgttcgagctc
agcgagatgctcctcatgcttctggctgccgggaccgatgacgacgtgaccgactccgaa
gatgagtgggacttgttccacgaagagctggacgattactacgagctgtacctatag
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